The 2.0 version of rSNPBase

Variant report

Variant rs34982663
Chromosome Location chr10:852521-852522
allele C/G/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:835600-853000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr10:835800-852800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr10:836000-852800 Weak transcription Rectal Smooth Muscle rectum
4 chr10:836200-852600 Weak transcription Osteobl bone
5 chr10:836600-853000 Weak transcription Stomach Mucosa stomach
6 chr10:839200-852800 Weak transcription NHDF-Ad bronchial
7 chr10:843400-852800 Weak transcription Brain Substantia Nigra brain
8 chr10:843400-853000 Weak transcription Aorta Aorta
9 chr10:843600-852600 Weak transcription Primary T cells from cord blood blood
10 chr10:843600-852800 Weak transcription HSMMtube muscle
11 chr10:844000-852600 Weak transcription HMEC breast
12 chr10:844600-857400 Weak transcription Primary T killer naive cells fromperipheralblood blood
13 chr10:846600-853000 Weak transcription A549 lung
14 chr10:846800-853000 Weak transcription NHEK skin
15 chr10:849400-853000 Weak transcription Primary T helper cells fromperipheralblood blood
16 chr10:849400-856400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
17 chr10:849600-852800 Weak transcription Rectal Mucosa Donor 29 rectum
18 chr10:849600-877800 Strong transcription Fetal Intestine Small intestine
19 chr10:850000-852800 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
20 chr10:850000-853800 Genic enhancers Fetal Adrenal Gland Adrenal Gland
21 chr10:850200-853000 Weak transcription iPS-18 Cell Line embryonic stem cell
22 chr10:850200-857200 Weak transcription Small Intestine intestine
23 chr10:850400-852600 Weak transcription Right Ventricle heart
24 chr10:850400-853000 Weak transcription iPS-15b Cell Line embryonic stem cell
25 chr10:850400-854400 Weak transcription Fetal Heart heart
26 chr10:850400-855200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr10:850600-852600 Weak transcription HUES6 Cell Line embryonic stem cell
28 chr10:850600-853600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr10:850600-853600 Weak transcription Primary B cells from cord blood blood
30 chr10:850600-856000 Strong transcription Brain Germinal Matrix brain
31 chr10:850600-856600 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr10:850600-859000 Weak transcription Primary T killer memory cells from peripheral blood blood
33 chr10:850800-852600 Weak transcription GM12878-XiMat blood
34 chr10:850800-852800 Weak transcription Primary T helper naive cells fromperipheralblood blood
35 chr10:850800-852800 Weak transcription Fetal Lung lung
36 chr10:850800-856600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
37 chr10:850800-857800 Weak transcription Colon Smooth Muscle Colon
38 chr10:850800-862800 Weak transcription Right Atrium heart
39 chr10:850800-864800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr10:850800-877800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr10:851000-852800 Weak transcription HUES64 Cell Line embryonic stem cell
42 chr10:851000-852800 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
43 chr10:851000-852800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
44 chr10:851000-852800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr10:851000-852800 Weak transcription Fetal Thymus thymus
46 chr10:851000-852800 Weak transcription NH-A brain
47 chr10:851000-853000 Weak transcription Primary T helper cells PMA-I stimulated --
48 chr10:851000-856600 Strong transcription Fetal Brain Female brain
49 chr10:851000-883000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr10:851200-853000 Weak transcription iPS-20b Cell Line embryonic stem cell

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Last update: Aug 31, 2015