The 2.0 version of rSNPBase

Variant report

Variant rs12762228
Chromosome Location chr10:880854-880855
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:851000-883000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
2 chr10:851600-883000 Strong transcription Fetal Intestine Large intestine
3 chr10:851600-889800 Strong transcription Dnd41 blood
4 chr10:851600-890800 Strong transcription Duodenum Mucosa Duodenum
5 chr10:851600-895600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
6 chr10:851800-894000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr10:851800-895800 Strong transcription Primary hematopoietic stem cells short term culture blood
8 chr10:852000-882800 Strong transcription Primary T regulatory cells fromperipheralblood blood
9 chr10:852200-956400 Weak transcription ES-WA7 Cell Line embryonic stem cell
10 chr10:852600-883400 Strong transcription Primary T cells from cord blood blood
11 chr10:852800-891800 Strong transcription HUES64 Cell Line embryonic stem cell
12 chr10:852800-894600 Strong transcription Rectal Mucosa Donor 29 rectum
13 chr10:852800-895000 Strong transcription Fetal Thymus thymus
14 chr10:856200-892800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
15 chr10:865400-890000 Weak transcription Right Atrium heart
16 chr10:866000-882000 Strong transcription Fetal Muscle Leg muscle
17 chr10:866200-882200 Strong transcription HSMM muscle
18 chr10:867400-890200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr10:868200-881800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr10:868800-883200 Strong transcription Placenta Placenta
21 chr10:869000-889400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr10:869400-882000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr10:869400-890800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr10:869600-882800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
25 chr10:869600-894000 Strong transcription Primary neutrophils fromperipheralblood blood
26 chr10:869600-895200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
27 chr10:869600-896000 Strong transcription Monocytes-CD14+_RO01746 blood
28 chr10:870000-892000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr10:870000-892200 Strong transcription Primary B cells from peripheral blood blood
30 chr10:870000-896400 Strong transcription Primary monocytes fromperipheralblood blood
31 chr10:870600-892200 Strong transcription Primary T helper cells fromperipheralblood blood
32 chr10:870600-959400 Weak transcription Stomach Mucosa stomach
33 chr10:870800-882800 Strong transcription Primary T cells fromperipheralblood blood
34 chr10:871600-886800 Weak transcription Small Intestine intestine
35 chr10:871800-885400 Weak transcription ES-I3 Cell Line embryonic stem cell
36 chr10:872200-881000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr10:872400-889800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
38 chr10:873400-895600 Strong transcription Primary B cells from cord blood blood
39 chr10:875200-882400 Weak transcription Pancreatic Islets Pancreatic Islet
40 chr10:875200-882800 Weak transcription Colon Smooth Muscle Colon
41 chr10:875200-885800 Weak transcription iPS-15b Cell Line embryonic stem cell
42 chr10:875400-881200 Weak transcription Primary T killer memory cells from peripheral blood blood
43 chr10:875400-881200 Weak transcription Rectal Smooth Muscle rectum
44 chr10:875400-881200 Weak transcription Right Ventricle heart
45 chr10:875400-885000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
46 chr10:875400-885200 Weak transcription Placenta Amnion Placenta Amnion
47 chr10:875400-885400 Weak transcription Fetal Brain Male brain
48 chr10:875400-885600 Weak transcription Brain Angular Gyrus brain
49 chr10:875400-890000 Weak transcription Fetal Heart heart
50 chr10:875400-903000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived

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Last update: Aug 31, 2015