The 2.0 version of rSNPBase

Variant report

Variant rs11253504
Chromosome Location chr10:956046-956047
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:852200-956400 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr10:870600-959400 Weak transcription Stomach Mucosa stomach
3 chr10:927600-972600 Weak transcription Hela-S3 cervix
4 chr10:928000-963200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
5 chr10:928000-966400 Weak transcription Small Intestine intestine
6 chr10:929400-975800 Weak transcription H9 Cell Line embryonic stem cell
7 chr10:929400-976400 Weak transcription Placenta Amnion Placenta Amnion
8 chr10:931600-965400 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr10:931600-967400 Weak transcription Skeletal Muscle Female skeletal muscle
10 chr10:931800-957600 Weak transcription Aorta Aorta
11 chr10:935400-964000 Weak transcription Psoas Muscle Psoas
12 chr10:940000-970200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
13 chr10:940200-967600 Weak transcription iPS-15b Cell Line embryonic stem cell
14 chr10:944600-956200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
15 chr10:946000-965400 Weak transcription Primary T killer memory cells from peripheral blood blood
16 chr10:946000-966600 Weak transcription Primary T killer naive cells fromperipheralblood blood
17 chr10:946200-956200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
18 chr10:946200-965400 Weak transcription Primary T helper naive cells from peripheral blood blood
19 chr10:947200-958400 Strong transcription Primary hematopoietic stem cells short term culture blood
20 chr10:947800-956200 Weak transcription Colon Smooth Muscle Colon
21 chr10:947800-975400 Weak transcription Fetal Brain Male brain
22 chr10:948800-958600 Strong transcription Monocytes-CD14+_RO01746 blood
23 chr10:949000-959800 Strong transcription Dnd41 blood
24 chr10:949600-959000 Weak transcription Pancreatic Islets Pancreatic Islet
25 chr10:949600-965400 Weak transcription Right Ventricle heart
26 chr10:949600-974600 Weak transcription H1 Cell Line embryonic stem cell
27 chr10:949800-956200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr10:950800-956200 Weak transcription Right Atrium heart
29 chr10:950800-958400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr10:951000-975400 Weak transcription Fetal Kidney kidney
31 chr10:951400-958000 Strong transcription Duodenum Mucosa Duodenum
32 chr10:951400-958800 Strong transcription Fetal Stomach stomach
33 chr10:951600-958600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
34 chr10:951800-956200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr10:951800-956400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
36 chr10:951800-956400 Weak transcription NHLF lung
37 chr10:952000-958000 Strong transcription Placenta Placenta
38 chr10:952200-956200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
39 chr10:952200-957400 Weak transcription iPS-18 Cell Line embryonic stem cell
40 chr10:952200-958000 Strong transcription Primary B cells from cord blood blood
41 chr10:952200-958200 Strong transcription Fetal Muscle Leg muscle
42 chr10:952400-958000 Strong transcription Primary neutrophils fromperipheralblood blood
43 chr10:952400-958000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr10:952600-956200 Weak transcription Brain Cingulate Gyrus brain
45 chr10:952600-958200 Strong transcription Primary B cells from peripheral blood blood
46 chr10:952600-967800 Weak transcription Brain Angular Gyrus brain
47 chr10:952600-971000 Weak transcription Brain Substantia Nigra brain
48 chr10:952600-975400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
49 chr10:952800-958200 Strong transcription Primary T regulatory cells fromperipheralblood blood
50 chr10:952800-958200 Strong transcription Primary Natural Killer cells fromperipheralblood blood

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Last update: Aug 31, 2015