Variant report

Variant rs12250937
Chromosome Location chr10:900209-900210
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:852200-956400 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr10:870600-959400 Weak transcription Stomach Mucosa stomach
3 chr10:875400-903000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr10:883200-917200 Weak transcription Colonic Mucosa Colon
5 chr10:886400-902800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr10:886800-924400 Weak transcription Fetal Brain Male brain
7 chr10:890400-901800 Weak transcription Colon Smooth Muscle Colon
8 chr10:890400-902200 Weak transcription iPS-15b Cell Line embryonic stem cell
9 chr10:890400-902600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
10 chr10:890400-916000 Weak transcription Aorta Aorta
11 chr10:890800-901200 Weak transcription Rectal Smooth Muscle rectum
12 chr10:891600-901400 Weak transcription Placenta Amnion Placenta Amnion
13 chr10:892200-901600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
14 chr10:892400-902400 Weak transcription Brain Hippocampus Middle brain
15 chr10:892600-903000 Weak transcription Brain Angular Gyrus brain
16 chr10:892600-909400 Weak transcription Small Intestine intestine
17 chr10:892800-909000 Weak transcription Brain Cingulate Gyrus brain
18 chr10:892800-909000 Weak transcription Skeletal Muscle Male skeletal muscle
19 chr10:893000-900800 Strong transcription Fetal Lung lung
20 chr10:893000-902400 Weak transcription H9 Cell Line embryonic stem cell
21 chr10:893000-902400 Weak transcription Right Atrium heart
22 chr10:893000-902800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr10:893000-907600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
24 chr10:893000-909400 Weak transcription Primary T helper naive cells from peripheral blood blood
25 chr10:893200-900800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
26 chr10:893200-902800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
27 chr10:893200-902800 Weak transcription Primary T killer naive cells fromperipheralblood blood
28 chr10:893200-905400 Weak transcription Primary T killer memory cells from peripheral blood blood
29 chr10:893200-907000 Weak transcription Skeletal Muscle Female skeletal muscle
30 chr10:893200-908200 Weak transcription Spleen Spleen
31 chr10:893400-902400 Weak transcription Right Ventricle heart
32 chr10:893400-907800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
33 chr10:894000-912400 Weak transcription Psoas Muscle Psoas
34 chr10:894200-901600 Weak transcription Gastric stomach
35 chr10:894200-902800 Weak transcription NHLF lung
36 chr10:894400-906200 Weak transcription Ovary ovary
37 chr10:894600-902600 Strong transcription HSMM muscle
38 chr10:895400-903600 Strong transcription Rectal Mucosa Donor 29 rectum
39 chr10:895600-906000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr10:895800-902000 Weak transcription Stomach Smooth Muscle stomach
41 chr10:896200-901600 Weak transcription Adipose Nuclei Adipose
42 chr10:896200-902800 Strong transcription Primary hematopoietic stem cells short term culture blood
43 chr10:896200-909600 Weak transcription Brain Germinal Matrix brain
44 chr10:896400-901400 Weak transcription Brain Anterior Caudate brain
45 chr10:896400-901600 Weak transcription Fetal Heart heart
46 chr10:896400-902000 Strong transcription A549 lung
47 chr10:896600-900600 Weak transcription Fetal Brain Female brain
48 chr10:896600-901000 Weak transcription Fetal Kidney kidney
49 chr10:896600-901200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr10:896600-905800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived

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