The 2.0 version of rSNPBase

Variant report

Variant rs12781100
Chromosome Location chr10:838636-838637
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:831400-850000 Weak transcription Fetal Heart heart
2 chr10:835000-841800 Weak transcription Primary T helper cells fromperipheralblood blood
3 chr10:835400-838800 Weak transcription NHDF-Ad bronchial
4 chr10:835400-843000 Weak transcription Aorta Aorta
5 chr10:835600-838800 Weak transcription NH-A brain
6 chr10:835600-841400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr10:835600-841800 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr10:835600-842800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
9 chr10:835600-853000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr10:835800-838800 Weak transcription NHLF lung
11 chr10:835800-839600 Weak transcription HUES6 Cell Line embryonic stem cell
12 chr10:835800-852800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr10:836000-839200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr10:836000-840200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr10:836000-841400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr10:836000-842000 Weak transcription A549 lung
17 chr10:836000-849000 Weak transcription Right Ventricle heart
18 chr10:836000-849400 Weak transcription Rectal Mucosa Donor 29 rectum
19 chr10:836000-852000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr10:836000-852800 Weak transcription Rectal Smooth Muscle rectum
21 chr10:836200-840600 Weak transcription Spleen Spleen
22 chr10:836200-842800 Weak transcription Breast Myoepithelial Primary Cells Breast
23 chr10:836200-850200 Weak transcription Skeletal Muscle Male skeletal muscle
24 chr10:836200-852000 Weak transcription Ovary ovary
25 chr10:836200-852400 Weak transcription Brain Hippocampus Middle brain
26 chr10:836200-852600 Weak transcription Osteobl bone
27 chr10:836400-839000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr10:836400-848600 Weak transcription Skeletal Muscle Female skeletal muscle
29 chr10:836400-850400 Weak transcription Duodenum Mucosa Duodenum
30 chr10:836600-853000 Weak transcription Stomach Mucosa stomach
31 chr10:837000-842800 Weak transcription Placenta Placenta
32 chr10:837200-843000 Weak transcription Fetal Adrenal Gland Adrenal Gland
33 chr10:837800-848400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
34 chr10:838000-838800 Enhancers HSMMtube muscle
35 chr10:838000-839400 Enhancers Fetal Stomach stomach
36 chr10:838000-843000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
37 chr10:838000-851200 Weak transcription Gastric stomach
38 chr10:838200-839200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr10:838200-839400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
40 chr10:838200-839400 Enhancers Muscle Satellite Cultured Cells --
41 chr10:838200-839400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
42 chr10:838200-839400 Enhancers HSMM muscle
43 chr10:838200-840000 Weak transcription Esophagus oesophagus
44 chr10:838400-842000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
45 chr10:838600-839400 Enhancers Fetal Muscle Leg muscle

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015