The 2.0 version of rSNPBase

Variant report

Variant rs12779732
Chromosome Location chr2:86776272-86776273
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:86734000-86784800 Weak transcription Osteobl bone
2 chr2:86737400-86788400 Weak transcription Brain Hippocampus Middle brain
3 chr2:86737800-86779600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
4 chr2:86753800-86788400 Weak transcription HSMM muscle
5 chr2:86756000-86788400 Weak transcription Brain Anterior Caudate brain
6 chr2:86756600-86779000 Weak transcription Rectal Mucosa Donor 29 rectum
7 chr2:86756600-86779000 Weak transcription Stomach Smooth Muscle stomach
8 chr2:86756600-86784800 Weak transcription Left Ventricle heart
9 chr2:86756600-86789200 Weak transcription Aorta Aorta
10 chr2:86756800-86779400 Weak transcription NHDF-Ad bronchial
11 chr2:86761200-86788600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
12 chr2:86761200-86788800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr2:86761400-86779400 Weak transcription NHEK skin
14 chr2:86764600-86779600 Weak transcription HMEC breast
15 chr2:86768200-86785000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr2:86768800-86780000 Weak transcription Small Intestine intestine
17 chr2:86768800-86784200 Weak transcription Psoas Muscle Psoas
18 chr2:86768800-86785200 Weak transcription Stomach Mucosa stomach
19 chr2:86769400-86785600 Weak transcription Fetal Heart heart
20 chr2:86770000-86779000 Weak transcription Rectal Smooth Muscle rectum
21 chr2:86771000-86777600 ZNF genes & repeats H1 Cell Line embryonic stem cell
22 chr2:86771200-86788400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr2:86771400-86779000 Weak transcription Primary T killer naive cells fromperipheralblood blood
24 chr2:86771400-86786200 Weak transcription HSMMtube muscle
25 chr2:86772200-86779000 Weak transcription Primary T killer memory cells from peripheral blood blood
26 chr2:86772600-86776400 ZNF genes & repeats Brain Germinal Matrix brain
27 chr2:86772600-86777200 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr2:86772800-86778200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr2:86773000-86776600 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
30 chr2:86773000-86779000 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr2:86773200-86781400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr2:86773400-86784200 Weak transcription Skeletal Muscle Female skeletal muscle
33 chr2:86773600-86779600 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
34 chr2:86773800-86776600 Strong transcription Primary T helper cells PMA-I stimulated --
35 chr2:86773800-86778000 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
36 chr2:86774200-86788200 Weak transcription Adipose Nuclei Adipose
37 chr2:86774400-86777200 Weak transcription Liver Liver
38 chr2:86774400-86788800 Weak transcription Fetal Lung lung
39 chr2:86774600-86788200 Weak transcription Hela-S3 cervix
40 chr2:86774800-86778600 Weak transcription Primary B cells from cord blood blood
41 chr2:86774800-86778600 Weak transcription Primary T helper cells fromperipheralblood blood
42 chr2:86774800-86785200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr2:86775000-86779600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
44 chr2:86775200-86776400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
45 chr2:86775200-86777200 Strong transcription Primary B cells from peripheral blood blood
46 chr2:86775200-86782600 Weak transcription Rectal Mucosa Donor 31 rectum
47 chr2:86775200-86784200 Weak transcription A549 lung
48 chr2:86775200-86784800 Weak transcription Muscle Satellite Cultured Cells --
49 chr2:86775200-86785200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr2:86775200-86788200 Weak transcription K562 blood

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Last update: Aug 31, 2015