Variant report

Variant	rs12787891
Chromosome Location	chr11:32603149-32603150
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:32599748..32604204-chr11:32604276..32608693,5	MCF-7	breast:

Variant related genes	Relation type
ENSG00000149100	Chromatin interaction

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs11031883	0.85[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs12276207	0.94[ASN][1000 genomes]
rs12788831	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12789547	0.90[EUR][1000 genomes]
rs12789734	0.80[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12792216	0.80[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12794499	0.93[EUR][1000 genomes]
rs12796070	0.90[EUR][1000 genomes]
rs12805291	0.93[EUR][1000 genomes]
rs12807888	1.00[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12807989	0.80[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12808227	0.90[EUR][1000 genomes]
rs34254797	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs34480242	0.85[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs34495676	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35020878	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs35253549	0.93[EUR][1000 genomes]
rs36071525	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs4359178	0.90[EUR][1000 genomes]
rs67535916	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67559057	1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7111865	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7126059	0.93[EUR][1000 genomes]
rs71479164	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71479166	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:32597400-32604200	Weak transcription	K562	blood
2	chr11:32602200-32603600	Enhancers	ES-I3 Cell Line	embryonic stem cell
3	chr11:32602400-32603400	Enhancers	HUES48 Cell Line	embryonic stem cell
4	chr11:32602400-32603800	Enhancers	A549	lung
5	chr11:32602600-32603400	Enhancers	Dnd41	blood
6	chr11:32602800-32604800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr11:32603000-32603200	Active TSS	HepG2	liver
8	chr11:32603000-32604800	Weak transcription	HUES6 Cell Line	embryonic stem cell
9	chr11:32603000-32605000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell

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