Variant report

Variant	rs34254797
Chromosome Location	chr11:32631356-32631357
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:32624676..32629824-chr11:32630493..32635209,8	K562	blood:
2	chr11:32627803..32629576-chr11:32630493..32632805,2	K562	blood:

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs12787891	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12788831	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12789547	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12789734	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12792216	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12794499	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12796070	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12805291	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12807888	0.83[AMR][1000 genomes]
rs12807989	0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12808227	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs34495676	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs35020878	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs35253549	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36071525	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4359178	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs67535916	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs67559057	0.83[AMR][1000 genomes]
rs7111865	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7126059	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs71479164	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs71479166	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:32617000-32632000	Weak transcription	Gastric	stomach
2	chr11:32621000-32631600	Weak transcription	Brain Hippocampus Middle	brain
3	chr11:32621000-32631600	Weak transcription	Psoas Muscle	Psoas
4	chr11:32625400-32637200	Weak transcription	Fetal Heart	heart
5	chr11:32625800-32634800	Weak transcription	HepG2	liver
6	chr11:32626000-32631600	Weak transcription	Skeletal Muscle Male	skeletal muscle
7	chr11:32626200-32631800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
8	chr11:32626600-32632400	Weak transcription	Fetal Kidney	kidney
9	chr11:32627200-32631600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
10	chr11:32627200-32635000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
11	chr11:32627800-32631600	Weak transcription	Primary T helper cells PMA-I stimulated	--
12	chr11:32628200-32631600	Weak transcription	Duodenum Mucosa	Duodenum
13	chr11:32628200-32632600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
14	chr11:32628200-32635000	Weak transcription	Liver	Liver
15	chr11:32628200-32635400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
16	chr11:32629400-32635200	Weak transcription	Fetal Lung	lung
17	chr11:32629600-32631400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
18	chr11:32629600-32632400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
19	chr11:32630200-32631800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
20	chr11:32630200-32631800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
21	chr11:32630400-32632200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
22	chr11:32630800-32632000	Weak transcription	A549	lung

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