Variant report
| Variant | rs12790938 |
|---|---|
| Chromosome Location | chr11:9409871-9409872 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr11:9407200-9410200 | Weak transcription | Lung | lung |
| 2 | chr11:9407200-9425400 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 3 | chr11:9407200-9427000 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 4 | chr11:9407200-9430400 | Weak transcription | Spleen | Spleen |
| 5 | chr11:9407200-9430600 | Weak transcription | Esophagus | oesophagus |
| 6 | chr11:9407200-9430600 | Weak transcription | Pancreas | Pancrea |
| 7 | chr11:9407200-9430800 | Weak transcription | Gastric | stomach |
| 8 | chr11:9407400-9410000 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 9 | chr11:9407400-9410400 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 10 | chr11:9407400-9410600 | Weak transcription | Ovary | ovary |
| 11 | chr11:9407400-9414200 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 12 | chr11:9407400-9414200 | Weak transcription | Thymus | Thymus |
| 13 | chr11:9407400-9427000 | Weak transcription | Fetal Muscle Trunk | muscle |
| 14 | chr11:9407400-9427000 | Weak transcription | Left Ventricle | heart |
| 15 | chr11:9407600-9410200 | Enhancers | Primary T helper cells fromperipheralblood | blood |
| 16 | chr11:9407600-9413400 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 17 | chr11:9407600-9431400 | Weak transcription | HSMMtube | muscle |
| 18 | chr11:9407600-9442000 | Weak transcription | Fetal Brain Male | brain |
| 19 | chr11:9407600-9464000 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 20 | chr11:9407800-9410000 | Weak transcription | Primary B cells from peripheral blood | blood |
| 21 | chr11:9407800-9412800 | Weak transcription | Right Atrium | heart |
| 22 | chr11:9407800-9413400 | Weak transcription | Fetal Intestine Large | intestine |
| 23 | chr11:9407800-9417000 | Weak transcription | Placenta | Placenta |
| 24 | chr11:9407800-9417400 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 25 | chr11:9407800-9425400 | Weak transcription | Fetal Muscle Leg | muscle |
| 26 | chr11:9407800-9427000 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 27 | chr11:9408000-9410200 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 28 | chr11:9408000-9411000 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 29 | chr11:9408000-9413400 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 30 | chr11:9408000-9419000 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 31 | chr11:9408000-9419200 | Weak transcription | Fetal Lung | lung |
| 32 | chr11:9408000-9419800 | Weak transcription | Stomach Smooth Muscle | stomach |
| 33 | chr11:9408000-9424800 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 34 | chr11:9408200-9410800 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 35 | chr11:9408200-9418000 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 36 | chr11:9408200-9419600 | Weak transcription | Primary B cells from cord blood | blood |
| 37 | chr11:9408200-9431000 | Weak transcription | Brain Cingulate Gyrus | brain |
| 38 | chr11:9408400-9413400 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 39 | chr11:9408400-9419000 | Weak transcription | Brain Anterior Caudate | brain |
| 40 | chr11:9408400-9419200 | Weak transcription | Rectal Smooth Muscle | rectum |
| 41 | chr11:9408400-9428400 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 42 | chr11:9408600-9410200 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 43 | chr11:9408600-9411200 | Strong transcription | Fetal Thymus | thymus |
| 44 | chr11:9408600-9413600 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 45 | chr11:9408600-9419400 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 46 | chr11:9408800-9410800 | Weak transcription | NH-A | brain |
| 47 | chr11:9408800-9413400 | Weak transcription | Duodenum Mucosa | Duodenum |
| 48 | chr11:9408800-9426400 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 49 | chr11:9408800-9427000 | Weak transcription | Fetal Brain Female | brain |
| 50 | chr11:9408800-9431200 | Weak transcription | Brain Substantia Nigra | brain |
