Variant report

Variant	rs12799237
Chromosome Location	chr11:94343069-94343070
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs12278340	1.00[EUR][1000 genomes]
rs12279797	1.00[EUR][1000 genomes]
rs12291566	1.00[EUR][1000 genomes]
rs12294457	1.00[EUR][1000 genomes]
rs12786204	1.00[EUR][1000 genomes]
rs12808355	0.83[LWK][hapmap];0.93[MKK][hapmap];0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs34840079	1.00[EUR][1000 genomes]
rs34917558	1.00[EUR][1000 genomes]
rs35011724	1.00[EUR][1000 genomes]
rs35164064	1.00[EUR][1000 genomes]
rs35708933	1.00[EUR][1000 genomes]
rs35720344	1.00[EUR][1000 genomes]
rs71459739	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73514509	0.89[AFR][1000 genomes]
rs73514598	0.85[AFR][1000 genomes]
rs73516309	0.85[AFR][1000 genomes]

Chromatin state (count:37 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:94296600-94344800	Weak transcription	Left Ventricle	heart
2	chr11:94321000-94344800	Weak transcription	Lung	lung
3	chr11:94322200-94343600	Weak transcription	Psoas Muscle	Psoas
4	chr11:94323600-94351800	Weak transcription	Rectal Smooth Muscle	rectum
5	chr11:94324600-94343600	Weak transcription	Spleen	Spleen
6	chr11:94325000-94344400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
7	chr11:94325200-94357600	Weak transcription	Placenta Amnion	Placenta Amnion
8	chr11:94333000-94343200	Weak transcription	Sigmoid Colon	Sigmoid Colon
9	chr11:94333000-94346200	Weak transcription	Stomach Smooth Muscle	stomach
10	chr11:94336400-94343800	Weak transcription	Brain Substantia Nigra	brain
11	chr11:94336400-94349600	Weak transcription	Stomach Mucosa	stomach
12	chr11:94336400-94350200	Weak transcription	Brain Angular Gyrus	brain
13	chr11:94336600-94343400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
14	chr11:94340200-94345400	Strong transcription	Monocytes-CD14+_RO01746	blood
15	chr11:94340600-94343400	Strong transcription	Primary monocytes fromperipheralblood	blood
16	chr11:94341000-94343200	Strong transcription	Duodenum Smooth Muscle	Duodenum
17	chr11:94341000-94343200	Strong transcription	Rectal Mucosa Donor 29	rectum
18	chr11:94341000-94343200	Strong transcription	Rectal Mucosa Donor 31	rectum
19	chr11:94341600-94343200	Weak transcription	Colonic Mucosa	Colon
20	chr11:94341600-94343400	Weak transcription	Fetal Muscle Leg	muscle
21	chr11:94341600-94344600	Weak transcription	Fetal Intestine Small	intestine
22	chr11:94341600-94344800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
23	chr11:94341600-94348200	Weak transcription	Fetal Stomach	stomach
24	chr11:94341600-94355200	Weak transcription	Ovary	ovary
25	chr11:94341600-94355200	Weak transcription	Pancreas	Pancrea
26	chr11:94341600-94355400	Weak transcription	Gastric	stomach
27	chr11:94342000-94347600	Weak transcription	Aorta	Aorta
28	chr11:94342400-94343400	ZNF genes & repeats	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
29	chr11:94342600-94343200	Weak transcription	Primary T cells from cord blood	blood
30	chr11:94342600-94343800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
31	chr11:94342600-94344200	Weak transcription	Duodenum Mucosa	Duodenum
32	chr11:94342600-94344400	Weak transcription	Adipose Nuclei	Adipose
33	chr11:94342600-94345000	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
34	chr11:94342800-94343600	Strong transcription	Primary hematopoietic stem cells	blood
35	chr11:94342800-94345400	Weak transcription	Primary neutrophils fromperipheralblood	blood
36	chr11:94343000-94343200	ZNF genes & repeats	Brain Anterior Caudate	brain
37	chr11:94343000-94345000	ZNF genes & repeats	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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