Variant report

Variant	rs12808355
Chromosome Location	chr11:94350070-94350071
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs12278340	1.00[EUR][1000 genomes]
rs12279797	1.00[EUR][1000 genomes]
rs12291566	1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs12294457	1.00[EUR][1000 genomes]
rs12786204	1.00[EUR][1000 genomes]
rs12799237	0.83[LWK][hapmap];0.93[MKK][hapmap];0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs34840079	1.00[EUR][1000 genomes]
rs34917558	1.00[EUR][1000 genomes]
rs35011724	0.87[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs35164064	1.00[EUR][1000 genomes]
rs35708933	1.00[EUR][1000 genomes]
rs35720344	1.00[EUR][1000 genomes]
rs511184	1.00[TSI][hapmap]
rs71459739	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73514509	0.83[AFR][1000 genomes]
rs73514598	0.83[AFR][1000 genomes]
rs73516309	0.83[AFR][1000 genomes]

Chromatin state (count:39 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:94323600-94351800	Weak transcription	Rectal Smooth Muscle	rectum
2	chr11:94325200-94357600	Weak transcription	Placenta Amnion	Placenta Amnion
3	chr11:94336400-94350200	Weak transcription	Brain Angular Gyrus	brain
4	chr11:94341600-94355200	Weak transcription	Ovary	ovary
5	chr11:94341600-94355200	Weak transcription	Pancreas	Pancrea
6	chr11:94341600-94355400	Weak transcription	Gastric	stomach
7	chr11:94344400-94351000	Weak transcription	Rectal Mucosa Donor 29	rectum
8	chr11:94345000-94354800	Weak transcription	Left Ventricle	heart
9	chr11:94346800-94353000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr11:94346800-94353000	Weak transcription	Stomach Smooth Muscle	stomach
11	chr11:94347000-94351400	Weak transcription	Sigmoid Colon	Sigmoid Colon
12	chr11:94347000-94353000	Weak transcription	Duodenum Smooth Muscle	Duodenum
13	chr11:94347000-94353600	Weak transcription	Right Ventricle	heart
14	chr11:94347000-94355400	Weak transcription	Brain Substantia Nigra	brain
15	chr11:94347000-94355600	Weak transcription	Brain Hippocampus Middle	brain
16	chr11:94347000-94355800	Weak transcription	NHDF-Ad	bronchial
17	chr11:94347400-94354800	Weak transcription	Fetal Muscle Leg	muscle
18	chr11:94347400-94356600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
19	chr11:94347600-94357200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
20	chr11:94347600-94359600	Weak transcription	Adipose Nuclei	Adipose
21	chr11:94347800-94355600	Strong transcription	Monocytes-CD14+_RO01746	blood
22	chr11:94348000-94355200	Weak transcription	Primary hematopoietic stem cells	blood
23	chr11:94348200-94358400	Weak transcription	Brain Inferior Temporal Lobe	brain
24	chr11:94348600-94353000	Weak transcription	Fetal Intestine Small	intestine
25	chr11:94348600-94355400	Weak transcription	Spleen	Spleen
26	chr11:94349000-94353000	Weak transcription	Fetal Stomach	stomach
27	chr11:94349000-94356000	Strong transcription	Primary neutrophils fromperipheralblood	blood
28	chr11:94349400-94355400	Weak transcription	Primary T cells from cord blood	blood
29	chr11:94349600-94355400	Strong transcription	Primary monocytes fromperipheralblood	blood
30	chr11:94349600-94357000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
31	chr11:94349800-94350200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
32	chr11:94349800-94350200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
33	chr11:94349800-94350200	Strong transcription	Aorta	Aorta
34	chr11:94349800-94350400	Strong transcription	Rectal Mucosa Donor 31	rectum
35	chr11:94349800-94350600	Strong transcription	Duodenum Mucosa	Duodenum
36	chr11:94349800-94351000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
37	chr11:94349800-94353000	Weak transcription	Brain Anterior Caudate	brain
38	chr11:94349800-94353800	Weak transcription	Psoas Muscle	Psoas
39	chr11:94349800-94355600	Strong transcription	Fetal Intestine Large	intestine

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