The 2.0 version of rSNPBase

Variant report

Variant rs12799369
Chromosome Location chr11:107674220-107674221
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:107654000-107676800 Weak transcription NH-A brain
2 chr11:107656600-107679800 Weak transcription Osteobl bone
3 chr11:107658800-107679000 Weak transcription H1 Cell Line embryonic stem cell
4 chr11:107658800-107680600 Weak transcription Small Intestine intestine
5 chr11:107659000-107679200 Weak transcription iPS-15b Cell Line embryonic stem cell
6 chr11:107659400-107679200 Weak transcription ES-I3 Cell Line embryonic stem cell
7 chr11:107660800-107676800 Weak transcription Primary T cells fromperipheralblood blood
8 chr11:107661000-107678600 Weak transcription Lung lung
9 chr11:107661000-107693200 Weak transcription Spleen Spleen
10 chr11:107661200-107676000 Weak transcription Breast Myoepithelial Primary Cells Breast
11 chr11:107661600-107679600 Weak transcription H9 Cell Line embryonic stem cell
12 chr11:107661800-107675600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
13 chr11:107661800-107679200 Weak transcription Aorta Aorta
14 chr11:107661800-107680600 Weak transcription Primary T helper cells PMA-I stimulated --
15 chr11:107661800-107685800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
16 chr11:107661800-107691800 Weak transcription Esophagus oesophagus
17 chr11:107662000-107674400 Weak transcription Adipose Nuclei Adipose
18 chr11:107662200-107681000 Weak transcription Hela-S3 cervix
19 chr11:107662400-107675800 Weak transcription ES-WA7 Cell Line embryonic stem cell
20 chr11:107662400-107682800 Weak transcription Pancreas Pancrea
21 chr11:107662400-107686400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr11:107662800-107683800 Weak transcription iPS-18 Cell Line embryonic stem cell
23 chr11:107663000-107682800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
24 chr11:107663000-107683400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
25 chr11:107663000-107683600 Weak transcription Rectal Smooth Muscle rectum
26 chr11:107663200-107684200 Weak transcription HepG2 liver
27 chr11:107663200-107690200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr11:107663600-107676000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
29 chr11:107663600-107679000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr11:107663600-107682200 Weak transcription Ovary ovary
31 chr11:107664000-107676400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr11:107664600-107683800 Weak transcription Stomach Mucosa stomach
33 chr11:107664600-107686000 Weak transcription Gastric stomach
34 chr11:107665200-107675800 Weak transcription NHEK skin
35 chr11:107665400-107675000 Weak transcription A549 lung
36 chr11:107665800-107675800 Weak transcription Primary hematopoietic stem cells blood
37 chr11:107666200-107680600 Weak transcription iPS-20b Cell Line embryonic stem cell
38 chr11:107667800-107676200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr11:107670200-107680600 Weak transcription Primary T killer memory cells from peripheral blood blood
40 chr11:107670800-107685000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr11:107671200-107674600 Enhancers Fetal Intestine Large intestine
42 chr11:107671200-107677600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr11:107671200-107682600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr11:107671200-107682600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr11:107671600-107685000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr11:107671600-107685800 Weak transcription HSMM muscle
47 chr11:107671600-107686200 Weak transcription NHDF-Ad bronchial
48 chr11:107672000-107697000 Weak transcription Sigmoid Colon Sigmoid Colon
49 chr11:107672200-107677800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr11:107672400-107674800 Weak transcription Primary T helper naive cells fromperipheralblood blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015