Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:4918642..4921294-chr11:5101983..5104188,2	K562	blood:

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10219407	1.00[CHB][hapmap]
rs10500632	1.00[CEU][hapmap];1.00[CHB][hapmap]
rs11033729	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs11033730	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs11034704	1.00[CHB][hapmap]
rs12273089	1.00[CHB][hapmap]
rs12288920	1.00[CHB][hapmap]
rs12290571	1.00[ASN][1000 genomes]
rs12417099	1.00[CEU][hapmap];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12419598	1.00[CHB][hapmap];0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12421276	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs12421906	1.00[CEU][hapmap];1.00[CHB][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16907494	1.00[CHB][hapmap]
rs16907537	1.00[CHB][hapmap]
rs16907539	1.00[CHB][hapmap]
rs16907541	1.00[CHB][hapmap]
rs16907558	1.00[CHB][hapmap]
rs17252092	1.00[CHB][hapmap]
rs17252916	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1946637	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35808145	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7108225	1.00[CEU][hapmap];1.00[CHB][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7108641	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71480739	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9651650	1.00[CHB][hapmap]
rs993754	1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1054847	chr11:4642875-5200656	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	72 gene(s)	inside rSNPs	diseases
2	esv2758254	chr11:4907893-5135331	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	42 gene(s)	inside rSNPs	diseases
3	esv2759799	chr11:4907893-5135331	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	42 gene(s)	inside rSNPs	diseases
4	nsv8781	chr11:4916743-4921311	Inactive region	TF binding region Chromatin interactive region	1 gene(s)	n/a	diseases
5	nsv896917	chr11:4917089-4935470	Enhancers Weak transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	5 gene(s)	inside rSNPs	diseases
6	nsv975826	chr11:4919908-4925361	Inactive region	TF binding region Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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