Variant report

Variant	rs12824735
Chromosome Location	chr12:58672545-58672546
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs12809368	0.83[ASN][1000 genomes]
rs12809528	0.94[ASN][1000 genomes]
rs12817097	0.94[ASN][1000 genomes]
rs12822095	0.94[ASN][1000 genomes]
rs12822443	0.94[ASN][1000 genomes]
rs12824498	0.94[ASN][1000 genomes]
rs12825103	1.00[YRI][hapmap];0.94[ASN][1000 genomes]
rs1502807	0.80[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs34720173	0.83[ASN][1000 genomes]
rs73101998	0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv899124	chr12:58391839-58883507	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:58672000-58672800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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