The 2.0 version of rSNPBase

Variant report

Variant rs12898691
Chromosome Location chr15:49394598-49394599
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:49376200-49395200 Weak transcription Muscle Satellite Cultured Cells --
2 chr15:49376400-49397800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr15:49376600-49397600 Weak transcription NHLF lung
4 chr15:49378800-49396800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
5 chr15:49381400-49397400 Weak transcription Primary hematopoietic stem cells short term culture blood
6 chr15:49381400-49402400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr15:49381600-49398000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr15:49381800-49395600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr15:49382600-49402400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
10 chr15:49385600-49403200 Weak transcription Placenta Placenta
11 chr15:49386400-49395200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
12 chr15:49386400-49403400 Weak transcription Brain Hippocampus Middle brain
13 chr15:49386400-49404200 Weak transcription Brain Inferior Temporal Lobe brain
14 chr15:49386800-49402600 Weak transcription Gastric stomach
15 chr15:49387000-49397400 Weak transcription Primary T cells from cord blood blood
16 chr15:49387200-49397600 Weak transcription HSMMtube muscle
17 chr15:49387200-49397800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr15:49387200-49402400 Weak transcription Spleen Spleen
19 chr15:49387200-49403000 Weak transcription Dnd41 blood
20 chr15:49387400-49404200 Weak transcription Placenta Amnion Placenta Amnion
21 chr15:49388800-49395800 Weak transcription Liver Liver
22 chr15:49388800-49396800 Weak transcription Duodenum Mucosa Duodenum
23 chr15:49388800-49396800 Weak transcription Fetal Intestine Large intestine
24 chr15:49388800-49397400 Weak transcription K562 blood
25 chr15:49388800-49402400 Weak transcription Fetal Intestine Small intestine
26 chr15:49388800-49402400 Weak transcription Sigmoid Colon Sigmoid Colon
27 chr15:49388800-49402600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr15:49388800-49402600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
29 chr15:49388800-49402600 Weak transcription Left Ventricle heart
30 chr15:49388800-49402600 Weak transcription Ovary ovary
31 chr15:49388800-49402600 Weak transcription Pancreas Pancrea
32 chr15:49388800-49402600 Weak transcription Thymus Thymus
33 chr15:49388800-49402800 Weak transcription Lung lung
34 chr15:49388800-49404400 Weak transcription Rectal Mucosa Donor 29 rectum
35 chr15:49388800-49404600 Weak transcription Hela-S3 cervix
36 chr15:49388800-49418800 Weak transcription Rectal Mucosa Donor 31 rectum
37 chr15:49388800-49434800 Weak transcription Small Intestine intestine
38 chr15:49389600-49396000 Weak transcription Fetal Adrenal Gland Adrenal Gland
39 chr15:49389600-49404400 Weak transcription HepG2 liver
40 chr15:49390400-49403000 Weak transcription Aorta Aorta
41 chr15:49390800-49403000 Weak transcription Stomach Smooth Muscle stomach
42 chr15:49391200-49398000 Weak transcription Primary hematopoietic stem cells blood
43 chr15:49391200-49402400 Weak transcription Fetal Muscle Trunk muscle
44 chr15:49391400-49397400 Weak transcription Primary T helper cells fromperipheralblood blood
45 chr15:49391400-49402400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr15:49391400-49402600 Weak transcription Fetal Muscle Leg muscle
47 chr15:49391400-49404200 Weak transcription Cortex derived primary cultured neurospheres brain
48 chr15:49391600-49397800 Weak transcription NHDF-Ad bronchial
49 chr15:49391600-49402400 Weak transcription Esophagus oesophagus
50 chr15:49391600-49402600 Weak transcription Fetal Stomach stomach

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Last update: Aug 31, 2015