Variant report

Variant rs12899936
Chromosome Location chr15:40298068-40298069
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:40228200-40323800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
2 chr15:40236600-40303000 Weak transcription Small Intestine intestine
3 chr15:40249000-40304800 Weak transcription Primary T helper naive cells from peripheral blood blood
4 chr15:40250200-40299600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
5 chr15:40260800-40303400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
6 chr15:40277600-40303600 Strong transcription HUES48 Cell Line embryonic stem cell
7 chr15:40277600-40303800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr15:40277600-40304400 Strong transcription HUES6 Cell Line embryonic stem cell
9 chr15:40277800-40298200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
10 chr15:40277800-40303800 Strong transcription HUES64 Cell Line embryonic stem cell
11 chr15:40277800-40304400 Strong transcription H1 Cell Line embryonic stem cell
12 chr15:40277800-40304800 Strong transcription Primary hematopoietic stem cells short term culture blood
13 chr15:40277800-40305000 Strong transcription iPS-18 Cell Line embryonic stem cell
14 chr15:40277800-40305000 Strong transcription Monocytes-CD14+_RO01746 blood
15 chr15:40277800-40305400 Strong transcription Fetal Muscle Leg muscle
16 chr15:40277800-40305600 Strong transcription Primary monocytes fromperipheralblood blood
17 chr15:40278000-40305400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
18 chr15:40282800-40299000 Weak transcription K562 blood
19 chr15:40291600-40301200 Strong transcription Primary B cells from cord blood blood
20 chr15:40291600-40305800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr15:40291800-40305200 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr15:40291800-40305800 Weak transcription Pancreatic Islets Pancreatic Islet
23 chr15:40292000-40306600 Strong transcription Duodenum Smooth Muscle Duodenum
24 chr15:40292200-40301200 Strong transcription NHDF-Ad bronchial
25 chr15:40292400-40305800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr15:40292600-40306400 Strong transcription Primary T cells from cord blood blood
27 chr15:40292800-40300400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr15:40292800-40302400 Strong transcription Brain Hippocampus Middle brain
29 chr15:40292800-40306400 Strong transcription Adipose Nuclei Adipose
30 chr15:40293000-40298200 Strong transcription Fetal Stomach stomach
31 chr15:40293000-40298400 Strong transcription Fetal Intestine Large intestine
32 chr15:40293000-40301200 Strong transcription Brain Inferior Temporal Lobe brain
33 chr15:40293000-40302400 Strong transcription Brain Anterior Caudate brain
34 chr15:40293000-40306600 Strong transcription Fetal Muscle Trunk muscle
35 chr15:40293000-40306800 Strong transcription Skeletal Muscle Female skeletal muscle
36 chr15:40293000-40315000 Strong transcription Stomach Smooth Muscle stomach
37 chr15:40293200-40300400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr15:40293200-40301400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
39 chr15:40293200-40301600 Strong transcription Colon Smooth Muscle Colon
40 chr15:40293200-40302600 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
41 chr15:40293200-40305400 Strong transcription Fetal Adrenal Gland Adrenal Gland
42 chr15:40293200-40306000 Strong transcription Primary neutrophils fromperipheralblood blood
43 chr15:40293200-40306200 Strong transcription Rectal Mucosa Donor 29 rectum
44 chr15:40293400-40298400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr15:40293400-40305600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
46 chr15:40293600-40300400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr15:40294400-40305800 Strong transcription Fetal Thymus thymus
48 chr15:40294400-40306400 Strong transcription Duodenum Mucosa Duodenum
49 chr15:40294600-40301800 Strong transcription Primary T helper cells fromperipheralblood blood
50 chr15:40294800-40298200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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