The 2.0 version of rSNPBase

Variant report

Variant rs34519780
Chromosome Location chr15:40286630-40286631
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:40228200-40323800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
2 chr15:40236600-40303000 Weak transcription Small Intestine intestine
3 chr15:40249000-40304800 Weak transcription Primary T helper naive cells from peripheral blood blood
4 chr15:40250000-40294800 Weak transcription Primary T killer naive cells fromperipheralblood blood
5 chr15:40250200-40299600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
6 chr15:40260800-40303400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
7 chr15:40262600-40293800 Weak transcription Stomach Mucosa stomach
8 chr15:40269000-40293200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr15:40269000-40293200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
10 chr15:40269600-40295600 Weak transcription Fetal Heart heart
11 chr15:40276400-40295600 Weak transcription Primary T killer memory cells from peripheral blood blood
12 chr15:40277600-40287400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr15:40277600-40288000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr15:40277600-40288000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr15:40277600-40288400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr15:40277600-40294600 Strong transcription iPS-20b Cell Line embryonic stem cell
17 chr15:40277600-40303600 Strong transcription HUES48 Cell Line embryonic stem cell
18 chr15:40277600-40303800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr15:40277600-40304400 Strong transcription HUES6 Cell Line embryonic stem cell
20 chr15:40277800-40286800 Strong transcription Muscle Satellite Cultured Cells --
21 chr15:40277800-40287000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr15:40277800-40287600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr15:40277800-40287800 Strong transcription Rectal Smooth Muscle rectum
24 chr15:40277800-40288000 Strong transcription HMEC breast
25 chr15:40277800-40288200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
26 chr15:40277800-40288400 Strong transcription NH-A brain
27 chr15:40277800-40288600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr15:40277800-40288800 Strong transcription Placenta Placenta
29 chr15:40277800-40288800 Strong transcription Fetal Stomach stomach
30 chr15:40277800-40290200 Strong transcription Ovary ovary
31 chr15:40277800-40290200 Strong transcription Rectal Mucosa Donor 29 rectum
32 chr15:40277800-40290800 Strong transcription H9 Cell Line embryonic stem cell
33 chr15:40277800-40290800 Strong transcription Sigmoid Colon Sigmoid Colon
34 chr15:40277800-40290800 Strong transcription Skeletal Muscle Female skeletal muscle
35 chr15:40277800-40291000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
36 chr15:40277800-40291200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr15:40277800-40291200 Strong transcription Adipose Nuclei Adipose
38 chr15:40277800-40291200 Strong transcription Fetal Adrenal Gland Adrenal Gland
39 chr15:40277800-40291400 Strong transcription Primary T cells from cord blood blood
40 chr15:40277800-40291400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr15:40277800-40291400 Strong transcription Fetal Intestine Large intestine
42 chr15:40277800-40291400 Strong transcription Fetal Muscle Trunk muscle
43 chr15:40277800-40291600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr15:40277800-40293800 Strong transcription Duodenum Mucosa Duodenum
45 chr15:40277800-40294400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
46 chr15:40277800-40298200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr15:40277800-40303800 Strong transcription HUES64 Cell Line embryonic stem cell
48 chr15:40277800-40304400 Strong transcription H1 Cell Line embryonic stem cell
49 chr15:40277800-40304800 Strong transcription Primary hematopoietic stem cells short term culture blood
50 chr15:40277800-40305000 Strong transcription iPS-18 Cell Line embryonic stem cell

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015