The 2.0 version of rSNPBase

Variant report

Variant rs12975920
Chromosome Location chr19:41793137-41793138
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:41772800-41794400 Strong transcription iPS-18 Cell Line embryonic stem cell
2 chr19:41773000-41802400 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr19:41773000-41804000 Strong transcription Monocytes-CD14+_RO01746 blood
4 chr19:41773200-41794400 Strong transcription iPS-20b Cell Line embryonic stem cell
5 chr19:41773200-41794600 Strong transcription HUES48 Cell Line embryonic stem cell
6 chr19:41773200-41802200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
7 chr19:41773200-41814400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr19:41773400-41793200 Strong transcription Brain Anterior Caudate brain
9 chr19:41773400-41794400 Strong transcription HUES6 Cell Line embryonic stem cell
10 chr19:41773400-41794600 Strong transcription HUES64 Cell Line embryonic stem cell
11 chr19:41773400-41802200 Strong transcription Primary T regulatory cells fromperipheralblood blood
12 chr19:41773400-41802200 Strong transcription Rectal Mucosa Donor 31 rectum
13 chr19:41773600-41793400 Strong transcription K562 blood
14 chr19:41773600-41793400 Strong transcription NH-A brain
15 chr19:41773600-41793600 Strong transcription H1 Cell Line embryonic stem cell
16 chr19:41773600-41801400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr19:41773600-41801800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr19:41773600-41802200 Strong transcription Primary hematopoietic stem cells short term culture blood
19 chr19:41773600-41802200 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
20 chr19:41773600-41802200 Strong transcription Placenta Placenta
21 chr19:41773600-41802200 Strong transcription HSMM muscle
22 chr19:41773600-41802800 Weak transcription Right Atrium heart
23 chr19:41773600-41803400 Strong transcription Sigmoid Colon Sigmoid Colon
24 chr19:41773600-41804400 Strong transcription Thymus Thymus
25 chr19:41773600-41812600 Strong transcription A549 lung
26 chr19:41773800-41793800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
27 chr19:41773800-41794600 Strong transcription Primary T helper 17 cells PMA-I stimulated --
28 chr19:41773800-41798400 Strong transcription Adipose Nuclei Adipose
29 chr19:41773800-41800200 Strong transcription Breast Myoepithelial Primary Cells Breast
30 chr19:41773800-41800200 Strong transcription Fetal Intestine Large intestine
31 chr19:41773800-41800200 Strong transcription Fetal Intestine Small intestine
32 chr19:41773800-41801400 Strong transcription HMEC breast
33 chr19:41773800-41801600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
34 chr19:41773800-41801600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr19:41773800-41801600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
36 chr19:41773800-41802000 Strong transcription Rectal Mucosa Donor 29 rectum
37 chr19:41773800-41802200 Strong transcription Fetal Muscle Trunk muscle
38 chr19:41773800-41802200 Strong transcription Fetal Thymus thymus
39 chr19:41773800-41802200 Strong transcription Skeletal Muscle Male skeletal muscle
40 chr19:41773800-41802400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
41 chr19:41773800-41802600 Strong transcription Primary B cells from peripheral blood blood
42 chr19:41773800-41802800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr19:41773800-41802800 Strong transcription Fetal Stomach stomach
44 chr19:41773800-41803200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr19:41773800-41803800 Strong transcription Liver Liver
46 chr19:41773800-41814200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr19:41773800-41814200 Strong transcription Cortex derived primary cultured neurospheres brain
48 chr19:41773800-41814200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr19:41774000-41795000 Strong transcription Duodenum Smooth Muscle Duodenum
50 chr19:41774000-41800000 Strong transcription Duodenum Mucosa Duodenum

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Last update: Aug 31, 2015