The 2.0 version of rSNPBase

Variant report

Variant rs12990810
Chromosome Location chr2:113642532-113642533
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:113629200-113643200 Weak transcription Right Atrium heart
2 chr2:113632800-113644400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr2:113637000-113643600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
4 chr2:113639200-113644400 Enhancers NHEK skin
5 chr2:113639200-113647800 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr2:113639600-113645400 Weak transcription Primary neutrophils fromperipheralblood blood
7 chr2:113640000-113642600 Weak transcription Osteobl bone
8 chr2:113640400-113645400 Weak transcription Primary hematopoietic stem cells short term culture blood
9 chr2:113640400-113647800 Weak transcription Brain Inferior Temporal Lobe brain
10 chr2:113641600-113642800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr2:113642200-113642600 Enhancers ES-I3 Cell Line embryonic stem cell
12 chr2:113642200-113642600 Enhancers ES-WA7 Cell Line embryonic stem cell
13 chr2:113642200-113642600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
14 chr2:113642200-113642600 Enhancers HUES64 Cell Line embryonic stem cell
15 chr2:113642200-113642600 Enhancers iPS-18 Cell Line embryonic stem cell
16 chr2:113642200-113642600 Enhancers iPS-20b Cell Line embryonic stem cell
17 chr2:113642200-113642600 Enhancers Liver Liver
18 chr2:113642200-113642600 Enhancers Stomach Mucosa stomach
19 chr2:113642200-113642800 Enhancers HUES6 Cell Line embryonic stem cell
20 chr2:113642200-113642800 Enhancers Primary monocytes fromperipheralblood blood
21 chr2:113642200-113643000 Enhancers iPS-15b Cell Line embryonic stem cell
22 chr2:113642200-113643200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr2:113642200-113643200 Enhancers Primary T helper naive cells from peripheral blood blood
24 chr2:113642200-113643200 Enhancers Colon Smooth Muscle Colon
25 chr2:113642200-113643200 Enhancers GM12878-XiMat blood
26 chr2:113642200-113643200 Enhancers Hela-S3 cervix
27 chr2:113642200-113643600 Enhancers HMEC breast
28 chr2:113642400-113642600 Enhancers Brain Hippocampus Middle brain
29 chr2:113642400-113642800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr2:113642400-113642800 Enhancers Primary T regulatory cells fromperipheralblood blood
31 chr2:113642400-113642800 Enhancers Primary Natural Killer cells fromperipheralblood blood
32 chr2:113642400-113643000 Enhancers Monocytes-CD14+_RO01746 blood
33 chr2:113642400-113643200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
34 chr2:113642400-113643200 Enhancers Primary T cells fromperipheralblood blood
35 chr2:113642400-113643200 Enhancers Primary hematopoietic stem cells blood
36 chr2:113642400-113643200 Enhancers Primary T helper cells PMA-I stimulated --
37 chr2:113642400-113643200 Enhancers Primary T helper cells fromperipheralblood blood
38 chr2:113642400-113643200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr2:113642400-113643200 Enhancers Fetal Thymus thymus
40 chr2:113642400-113643200 Enhancers K562 blood
41 chr2:113642400-113643400 Enhancers HepG2 liver
42 chr2:113642400-113643400 Enhancers NHDF-Ad bronchial

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Last update: Aug 31, 2015