Variant report

Variant rs12998025
Chromosome Location chr2:86407549-86407550
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:86335000-86409000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr2:86335400-86408800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
3 chr2:86335600-86408600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
4 chr2:86342800-86408600 Strong transcription HUES64 Cell Line embryonic stem cell
5 chr2:86342800-86408600 Strong transcription iPS-20b Cell Line embryonic stem cell
6 chr2:86343000-86408600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr2:86381600-86409000 Strong transcription Fetal Thymus thymus
8 chr2:86381800-86409000 Strong transcription Primary T regulatory cells fromperipheralblood blood
9 chr2:86386200-86413000 Weak transcription ES-WA7 Cell Line embryonic stem cell
10 chr2:86387600-86410000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr2:86390000-86407600 Strong transcription A549 lung
12 chr2:86390400-86421200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr2:86390600-86411200 Weak transcription iPS-15b Cell Line embryonic stem cell
14 chr2:86393400-86413400 Weak transcription Gastric stomach
15 chr2:86393800-86413600 Weak transcription Esophagus oesophagus
16 chr2:86394800-86408600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
17 chr2:86394800-86409000 Strong transcription Primary hematopoietic stem cells short term culture blood
18 chr2:86395200-86408600 Strong transcription Rectal Mucosa Donor 29 rectum
19 chr2:86396000-86408000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
20 chr2:86396400-86412600 Weak transcription Brain Anterior Caudate brain
21 chr2:86396600-86413000 Weak transcription ES-I3 Cell Line embryonic stem cell
22 chr2:86398600-86417200 Weak transcription Fetal Brain Male brain
23 chr2:86400000-86411400 Weak transcription Aorta Aorta
24 chr2:86400200-86412800 Weak transcription Rectal Smooth Muscle rectum
25 chr2:86400400-86412800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
26 chr2:86400800-86408600 Strong transcription HMEC breast
27 chr2:86401800-86408400 Strong transcription Adipose Nuclei Adipose
28 chr2:86402000-86408400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr2:86402600-86408600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr2:86402600-86408600 Strong transcription Primary B cells from cord blood blood
31 chr2:86402600-86408600 Strong transcription Monocytes-CD14+_RO01746 blood
32 chr2:86402800-86407800 Strong transcription Primary T cells fromperipheralblood blood
33 chr2:86402800-86408400 Strong transcription Duodenum Mucosa Duodenum
34 chr2:86402800-86408600 Strong transcription Primary monocytes fromperipheralblood blood
35 chr2:86402800-86408600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr2:86402800-86408600 Strong transcription Fetal Intestine Large intestine
37 chr2:86403000-86407600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
38 chr2:86403000-86408600 Strong transcription HUES6 Cell Line embryonic stem cell
39 chr2:86403000-86408600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr2:86403000-86408600 Strong transcription Sigmoid Colon Sigmoid Colon
41 chr2:86403400-86408400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
42 chr2:86403600-86413000 Weak transcription Right Ventricle heart
43 chr2:86403800-86408200 Strong transcription Primary T helper cells PMA-I stimulated --
44 chr2:86403800-86408600 Strong transcription HepG2 liver
45 chr2:86403800-86411800 Weak transcription Stomach Mucosa stomach
46 chr2:86404000-86408600 Strong transcription Primary T helper cells fromperipheralblood blood
47 chr2:86404000-86409000 Weak transcription Primary T killer memory cells from peripheral blood blood
48 chr2:86404000-86421200 Weak transcription H9 Cell Line embryonic stem cell
49 chr2:86404200-86408600 Strong transcription Fetal Muscle Trunk muscle
50 chr2:86404400-86408600 Strong transcription Fetal Stomach stomach

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