Variant report

Variant rs6730226
Chromosome Location chr2:86416915-86416916
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:86390400-86421200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr2:86398600-86417200 Weak transcription Fetal Brain Male brain
3 chr2:86404000-86421200 Weak transcription H9 Cell Line embryonic stem cell
4 chr2:86406000-86421200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr2:86407000-86421200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
6 chr2:86407200-86417800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr2:86407200-86418600 Weak transcription Ovary ovary
8 chr2:86407200-86420800 Weak transcription Placenta Amnion Placenta Amnion
9 chr2:86407200-86421000 Weak transcription Small Intestine intestine
10 chr2:86407200-86421200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr2:86407600-86417000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr2:86408400-86417000 Weak transcription iPS-18 Cell Line embryonic stem cell
13 chr2:86408400-86421000 Weak transcription Brain Germinal Matrix brain
14 chr2:86408600-86419000 Weak transcription Fetal Muscle Trunk muscle
15 chr2:86408600-86420600 Weak transcription NH-A brain
16 chr2:86408600-86421000 Weak transcription Fetal Intestine Large intestine
17 chr2:86408600-86421200 Weak transcription H1 Cell Line embryonic stem cell
18 chr2:86411600-86417000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr2:86411600-86421200 Weak transcription Aorta Aorta
20 chr2:86412400-86420600 Weak transcription Stomach Mucosa stomach
21 chr2:86412400-86421000 Weak transcription Right Atrium heart
22 chr2:86412800-86417800 Weak transcription Liver Liver
23 chr2:86413200-86417000 Weak transcription HMEC breast
24 chr2:86413200-86417200 Weak transcription Hela-S3 cervix
25 chr2:86413400-86419800 Genic enhancers Dnd41 blood
26 chr2:86413400-86419800 Weak transcription Osteobl bone
27 chr2:86413400-86420800 Weak transcription Rectal Mucosa Donor 29 rectum
28 chr2:86413600-86418400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
29 chr2:86413600-86419600 Weak transcription Brain Inferior Temporal Lobe brain
30 chr2:86413800-86417000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
31 chr2:86413800-86417200 Enhancers Primary T helper naive cells fromperipheralblood blood
32 chr2:86413800-86417200 Enhancers Primary T helper 17 cells PMA-I stimulated --
33 chr2:86413800-86417200 Weak transcription Brain Substantia Nigra brain
34 chr2:86413800-86417400 Enhancers Primary T cells from cord blood blood
35 chr2:86413800-86417600 Weak transcription Psoas Muscle Psoas
36 chr2:86413800-86418000 Weak transcription Adipose Nuclei Adipose
37 chr2:86413800-86418000 Weak transcription Spleen Spleen
38 chr2:86413800-86418400 Weak transcription Lung lung
39 chr2:86413800-86418600 Weak transcription NHEK skin
40 chr2:86413800-86419600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr2:86413800-86419800 Weak transcription Muscle Satellite Cultured Cells --
42 chr2:86413800-86420200 Weak transcription Brain Cingulate Gyrus brain
43 chr2:86413800-86420600 Weak transcription Sigmoid Colon Sigmoid Colon
44 chr2:86413800-86420600 Weak transcription NHDF-Ad bronchial
45 chr2:86413800-86420800 Weak transcription Brain Anterior Caudate brain
46 chr2:86413800-86421000 Weak transcription Brain Angular Gyrus brain
47 chr2:86413800-86421000 Weak transcription Gastric stomach
48 chr2:86414000-86417200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
49 chr2:86414000-86419800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr2:86414000-86420600 Weak transcription Brain Hippocampus Middle brain

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