Variant report

Variant rs7563742
Chromosome Location chr2:86428218-86428219
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:86425800-86429800 Active TSS GM12878-XiMat blood
2 chr2:86426000-86428400 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
3 chr2:86426200-86428800 Active TSS K562 blood
4 chr2:86427000-86433800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr2:86427200-86428400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
6 chr2:86427200-86431200 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr2:86427200-86432600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
8 chr2:86427200-86433400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr2:86427200-86433400 Weak transcription Gastric stomach
10 chr2:86427200-86433600 Weak transcription Esophagus oesophagus
11 chr2:86427200-86433600 Weak transcription Lung lung
12 chr2:86427200-86433600 Weak transcription Pancreas Pancrea
13 chr2:86427200-86433600 Weak transcription Stomach Mucosa stomach
14 chr2:86427200-86434600 Weak transcription Small Intestine intestine
15 chr2:86427200-86444200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
16 chr2:86427200-86450200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr2:86427400-86428400 Enhancers Primary T helper naive cells fromperipheralblood blood
18 chr2:86427400-86428400 Enhancers Primary T regulatory cells fromperipheralblood blood
19 chr2:86427400-86428400 Enhancers Primary mononuclear cells fromperipheralblood Blood
20 chr2:86427400-86428400 Enhancers Brain Hippocampus Middle brain
21 chr2:86427400-86428400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
22 chr2:86427400-86428400 Enhancers Colonic Mucosa Colon
23 chr2:86427400-86428400 Enhancers Osteobl bone
24 chr2:86427400-86428800 Enhancers Brain Substantia Nigra brain
25 chr2:86427400-86429000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
26 chr2:86427400-86429000 Weak transcription H9 Cell Line embryonic stem cell
27 chr2:86427400-86429200 Weak transcription ES-WA7 Cell Line embryonic stem cell
28 chr2:86427400-86429200 Enhancers Primary T helper cells fromperipheralblood blood
29 chr2:86427400-86429200 Enhancers Colon Smooth Muscle Colon
30 chr2:86427400-86429400 Enhancers Primary T killer naive cells fromperipheralblood blood
31 chr2:86427400-86431200 Weak transcription Fetal Intestine Small intestine
32 chr2:86427400-86432400 Weak transcription Fetal Muscle Leg muscle
33 chr2:86427400-86432600 Weak transcription Primary T cells fromperipheralblood blood
34 chr2:86427400-86432600 Weak transcription Aorta Aorta
35 chr2:86427400-86432800 Weak transcription Placenta Placenta
36 chr2:86427400-86433600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
37 chr2:86427400-86433600 Weak transcription Ovary ovary
38 chr2:86427400-86433800 Weak transcription HSMMtube muscle
39 chr2:86427400-86448200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
40 chr2:86427600-86428400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr2:86427600-86428400 Enhancers Primary T helper cells PMA-I stimulated --
42 chr2:86427600-86428400 Enhancers Primary T helper 17 cells PMA-I stimulated --
43 chr2:86427600-86428400 Enhancers Fetal Brain Female brain
44 chr2:86427600-86428400 Enhancers Fetal Intestine Large intestine
45 chr2:86427600-86428400 Enhancers Skeletal Muscle Female skeletal muscle
46 chr2:86427600-86428400 Enhancers HSMM muscle
47 chr2:86427600-86429200 Enhancers Muscle Satellite Cultured Cells --
48 chr2:86427600-86429200 Enhancers Brain Cingulate Gyrus brain
49 chr2:86427600-86429200 Enhancers Pancreatic Islets Pancreatic Islet
50 chr2:86427600-86429400 Enhancers Liver Liver

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