Variant report

Variant	rs13018333
Chromosome Location	chr2:212546810-212546811
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10181864	0.83[ASN][1000 genomes]
rs10191972	0.86[ASN][1000 genomes]
rs11893380	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12694250	0.86[ASN][1000 genomes]
rs13016387	0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs13019783	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13026360	0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13420886	0.86[ASN][1000 genomes]
rs17413784	0.84[ASN][1000 genomes]
rs2272024	0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs34658976	0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs35762488	0.86[ASN][1000 genomes]
rs4315465	0.83[EUR][1000 genomes]
rs4493186	0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs59853762	0.83[EUR][1000 genomes]
rs61257038	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6435654	0.82[ASN][1000 genomes]
rs71422750	0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv875783	chr2:212530466-212564895	Strong transcription ZNF genes & repeats Enhancers Flanking Active TSS Weak transcription Genic enhancers Active TSS	TF binding region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:212546800-212547000	ZNF genes & repeats	Pancreas	Pancrea
2	chr2:212546800-212547200	ZNF genes & repeats	Aorta	Aorta
3	chr2:212546800-212547200	ZNF genes & repeats	Fetal Kidney	kidney
4	chr2:212546800-212547200	ZNF genes & repeats	Left Ventricle	heart

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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