The 2.0 version of rSNPBase

Variant report

Variant rs13091525
Chromosome Location chr3:49965551-49965552
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:49943800-49966000 Weak transcription Psoas Muscle Psoas
2 chr3:49944200-49966000 Weak transcription Rectal Smooth Muscle rectum
3 chr3:49944400-49966000 Weak transcription Primary T helper naive cells from peripheral blood blood
4 chr3:49944400-49966000 Weak transcription HUVEC blood vessel
5 chr3:49946800-49965800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr3:49948000-49966800 Weak transcription Fetal Heart heart
7 chr3:49948800-49966000 Weak transcription Primary B cells from peripheral blood blood
8 chr3:49949000-49966200 Weak transcription HUES48 Cell Line embryonic stem cell
9 chr3:49949400-49965600 Weak transcription Brain Hippocampus Middle brain
10 chr3:49949800-49965800 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr3:49949800-49966800 Weak transcription Aorta Aorta
12 chr3:49950000-49965800 Weak transcription Duodenum Smooth Muscle Duodenum
13 chr3:49950200-49966000 Weak transcription Cortex derived primary cultured neurospheres brain
14 chr3:49950400-49965800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
15 chr3:49950600-49965600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
16 chr3:49950600-49965600 Weak transcription Fetal Thymus thymus
17 chr3:49950600-49965800 Weak transcription Colon Smooth Muscle Colon
18 chr3:49950600-49966000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
19 chr3:49950600-49966000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr3:49950600-49966000 Weak transcription Brain Germinal Matrix brain
21 chr3:49950600-49966000 Weak transcription Sigmoid Colon Sigmoid Colon
22 chr3:49950600-49966200 Weak transcription Ovary ovary
23 chr3:49950600-49966800 Weak transcription Small Intestine intestine
24 chr3:49950800-49965600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
25 chr3:49950800-49965600 Weak transcription Placenta Placenta
26 chr3:49950800-49965800 Weak transcription Adipose Nuclei Adipose
27 chr3:49950800-49965800 Weak transcription Brain Anterior Caudate brain
28 chr3:49950800-49965800 Weak transcription Brain Substantia Nigra brain
29 chr3:49950800-49965800 Weak transcription Thymus Thymus
30 chr3:49950800-49965800 Weak transcription Spleen Spleen
31 chr3:49950800-49966000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr3:49950800-49966400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr3:49951000-49965600 Weak transcription Breast Myoepithelial Primary Cells Breast
34 chr3:49951200-49965600 Weak transcription Primary T helper cells fromperipheralblood blood
35 chr3:49953600-49966000 Weak transcription Esophagus oesophagus
36 chr3:49953800-49966000 Weak transcription Stomach Smooth Muscle stomach
37 chr3:49954600-49965600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
38 chr3:49954600-49965800 Weak transcription Primary hematopoietic stem cells short term culture blood
39 chr3:49955600-49965600 Weak transcription Fetal Brain Female brain
40 chr3:49956200-49966000 Weak transcription Primary B cells from cord blood blood
41 chr3:49956400-49965800 Weak transcription Primary monocytes fromperipheralblood blood
42 chr3:49956400-49966000 Weak transcription Primary hematopoietic stem cells blood
43 chr3:49956400-49966000 Weak transcription Monocytes-CD14+_RO01746 blood
44 chr3:49957800-49966000 Weak transcription Primary T helper naive cells fromperipheralblood blood
45 chr3:49959200-49965600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
46 chr3:49960600-49966800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
47 chr3:49961800-49965800 Weak transcription Liver Liver
48 chr3:49962200-49966000 Enhancers Fetal Intestine Large intestine
49 chr3:49962400-49965600 Weak transcription Skeletal Muscle Female skeletal muscle
50 chr3:49962400-49965800 Weak transcription Primary T cells from cord blood blood

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Last update: Aug 31, 2015