The 2.0 version of rSNPBase

Variant report

Variant rs62262106
Chromosome Location chr3:49991427-49991428
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:89 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:49978800-50000600 Weak transcription iPS-20b Cell Line embryonic stem cell
2 chr3:49978800-50004800 Weak transcription HUES6 Cell Line embryonic stem cell
3 chr3:49978800-50009600 Weak transcription H1 Cell Line embryonic stem cell
4 chr3:49978800-50009600 Weak transcription Fetal Kidney kidney
5 chr3:49978800-50041000 Weak transcription H9 Cell Line embryonic stem cell
6 chr3:49979000-49994600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
7 chr3:49979000-49997400 Weak transcription Cortex derived primary cultured neurospheres brain
8 chr3:49979000-50000000 Weak transcription Primary neutrophils fromperipheralblood blood
9 chr3:49979000-50000600 Weak transcription Primary T cells from cord blood blood
10 chr3:49979000-50001000 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr3:49979000-50003400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr3:49979000-50003600 Weak transcription Right Ventricle heart
13 chr3:49979000-50005200 Weak transcription Fetal Muscle Trunk muscle
14 chr3:49979000-50010200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr3:49979400-49995400 Weak transcription Placenta Placenta
16 chr3:49979400-49999000 Weak transcription Fetal Thymus thymus
17 chr3:49979400-49999600 Weak transcription Primary monocytes fromperipheralblood blood
18 chr3:49979400-50000400 Weak transcription Brain Germinal Matrix brain
19 chr3:49979600-49999800 Weak transcription Monocytes-CD14+_RO01746 blood
20 chr3:49979600-50004200 Weak transcription Primary hematopoietic stem cells blood
21 chr3:49980400-49997400 Weak transcription HepG2 liver
22 chr3:49980400-50003600 Weak transcription Brain Angular Gyrus brain
23 chr3:49980600-49999600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr3:49980600-50000000 Weak transcription Dnd41 blood
25 chr3:49980600-50001800 Weak transcription HUES48 Cell Line embryonic stem cell
26 chr3:49981400-49999800 Weak transcription HUES64 Cell Line embryonic stem cell
27 chr3:49981600-49999600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr3:49983800-49997600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr3:49983800-49999200 Weak transcription Fetal Muscle Leg muscle
30 chr3:49983800-50003400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
31 chr3:49984000-49998200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
32 chr3:49984000-50000400 Weak transcription Fetal Intestine Large intestine
33 chr3:49984200-49994800 Weak transcription Liver Liver
34 chr3:49984200-49998400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr3:49985400-49994800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
36 chr3:49985600-50000600 Weak transcription Primary B cells from cord blood blood
37 chr3:49986000-50000600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
38 chr3:49987000-49991800 Weak transcription Primary T cells fromperipheralblood blood
39 chr3:49987000-49997400 Weak transcription Right Atrium heart
40 chr3:49987600-49997800 Weak transcription Primary T regulatory cells fromperipheralblood blood
41 chr3:49987800-49997400 Weak transcription Primary B cells from peripheral blood blood
42 chr3:49988000-49997200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
43 chr3:49988000-49997400 Weak transcription Left Ventricle heart
44 chr3:49988000-50000600 Weak transcription Duodenum Mucosa Duodenum
45 chr3:49988000-50003000 Weak transcription NHEK skin
46 chr3:49988000-50003600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
47 chr3:49988000-50004200 Weak transcription Sigmoid Colon Sigmoid Colon
48 chr3:49988200-49992200 Weak transcription Small Intestine intestine
49 chr3:49988200-49995200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr3:49988200-49997200 Weak transcription Fetal Adrenal Gland Adrenal Gland

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Last update: Aug 31, 2015