The 2.0 version of rSNPBase

Variant report

Variant rs62262118
Chromosome Location chr3:50003586-50003587
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:49978800-50004800 Weak transcription HUES6 Cell Line embryonic stem cell
2 chr3:49978800-50009600 Weak transcription H1 Cell Line embryonic stem cell
3 chr3:49978800-50009600 Weak transcription Fetal Kidney kidney
4 chr3:49978800-50041000 Weak transcription H9 Cell Line embryonic stem cell
5 chr3:49979000-50003600 Weak transcription Right Ventricle heart
6 chr3:49979000-50005200 Weak transcription Fetal Muscle Trunk muscle
7 chr3:49979000-50010200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr3:49979600-50004200 Weak transcription Primary hematopoietic stem cells blood
9 chr3:49980400-50003600 Weak transcription Brain Angular Gyrus brain
10 chr3:49988000-50003600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr3:49988000-50004200 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr3:49988200-50007000 Weak transcription Primary T helper naive cells fromperipheralblood blood
13 chr3:49988200-50007400 Weak transcription Rectal Mucosa Donor 31 rectum
14 chr3:49988200-50010200 Weak transcription Gastric stomach
15 chr3:49988200-50010600 Weak transcription Primary T helper naive cells from peripheral blood blood
16 chr3:49988400-50009600 Weak transcription Fetal Brain Female brain
17 chr3:49988400-50009600 Weak transcription HUVEC blood vessel
18 chr3:49988800-50004800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
19 chr3:49989000-50004000 Weak transcription Pancreas Pancrea
20 chr3:49991200-50005800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr3:49992200-50037000 Weak transcription Primary T killer naive cells fromperipheralblood blood
22 chr3:49995000-50005200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr3:49995400-50033200 Weak transcription Fetal Brain Male brain
24 chr3:49995600-50005800 Weak transcription Spleen Spleen
25 chr3:49996400-50003600 Weak transcription HMEC breast
26 chr3:49996600-50010200 Weak transcription Lung lung
27 chr3:49997000-50010600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr3:49997600-50007400 Weak transcription Right Atrium heart
29 chr3:49997600-50009600 Weak transcription A549 lung
30 chr3:49997800-50003600 Weak transcription Cortex derived primary cultured neurospheres brain
31 chr3:49997800-50003600 Weak transcription Brain Substantia Nigra brain
32 chr3:49997800-50004000 Weak transcription Brain Anterior Caudate brain
33 chr3:49997800-50004000 Weak transcription Left Ventricle heart
34 chr3:49997800-50009600 Weak transcription Primary T killer memory cells from peripheral blood blood
35 chr3:49997800-50009800 Weak transcription iPS-15b Cell Line embryonic stem cell
36 chr3:49997800-50013800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr3:49998000-50078200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
38 chr3:49998200-50003800 Weak transcription Muscle Satellite Cultured Cells --
39 chr3:49998200-50003800 Weak transcription Brain Hippocampus Middle brain
40 chr3:49998200-50007600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
41 chr3:49998400-50003600 Weak transcription Fetal Lung lung
42 chr3:49998400-50003800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
43 chr3:49998400-50003800 Weak transcription NHLF lung
44 chr3:49998400-50004000 Weak transcription NHDF-Ad bronchial
45 chr3:49998400-50004800 Weak transcription Thymus Thymus
46 chr3:49998400-50029600 Weak transcription Fetal Heart heart
47 chr3:49998400-50078600 Weak transcription K562 blood
48 chr3:49998800-50003800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
49 chr3:49998800-50004200 Weak transcription Psoas Muscle Psoas
50 chr3:49998800-50019600 Strong transcription Primary hematopoietic stem cells short term culture blood

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Last update: Aug 31, 2015