Variant report
| Variant | rs13135153 |
|---|---|
| Chromosome Location | chr4:99664782-99664783 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:1 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr4:99663113..99664899-chr4:99849432..99851270,2 | MCF-7 | breast: |
| No data |
| No data |
| No data |
| Variant related genes | Relation type |
|---|---|
| ENSG00000263923 | Chromatin interaction |
| ENSG00000151247 | Chromatin interaction |
| ENSG00000238449 | Chromatin interaction |
rSNPs within LD-proxies of this variant (count:10)
| rs_ID | r2[population] |
|---|---|
| rs11930633 | 0.94[EUR][1000 genomes];0.97[ASN][1000 genomes] |
| rs13110567 | 0.95[EUR][1000 genomes] |
| rs13127330 | 0.90[JPT][hapmap] |
| rs17566763 | 0.93[EUR][1000 genomes] |
| rs1918738 | 0.90[EUR][1000 genomes] |
| rs34285632 | 0.95[EUR][1000 genomes] |
| rs4129895 | 1.00[CEU][hapmap];0.97[EUR][1000 genomes] |
| rs4699668 | 0.95[CEU][hapmap];0.90[EUR][1000 genomes] |
| rs62325474 | 0.95[EUR][1000 genomes] |
| rs62325476 | 0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes] |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
