Variant report

Variant	rs4699668
Chromosome Location	chr4:99666792-99666793
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 2 )

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs11930633	0.90[EUR][1000 genomes]
rs13110567	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13135153	0.95[CEU][hapmap];0.90[EUR][1000 genomes]
rs1528010	0.82[EUR][1000 genomes]
rs17566763	0.85[EUR][1000 genomes]
rs1822528	0.81[EUR][1000 genomes]
rs1918738	0.83[EUR][1000 genomes]
rs1987658	0.81[EUR][1000 genomes]
rs34285632	0.90[EUR][1000 genomes]
rs4129895	0.95[CEU][hapmap];0.82[JPT][hapmap];0.94[TSI][hapmap];0.91[EUR][1000 genomes]
rs62325474	0.90[EUR][1000 genomes]
rs62325476	0.90[EUR][1000 genomes]

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs4699668	ADH5	cis	cerebellum	SCAN
rs4699668	DAPP1	cis	cerebellum	SCAN

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:99665200-99666800	Enhancers	HUVEC	blood vessel
2	chr4:99665800-99667800	Weak transcription	Sigmoid Colon	Sigmoid Colon

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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