The 2.0 version of rSNPBase

Variant report

Variant rs13137823
Chromosome Location chr4:149022906-149022907
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:148992200-149035000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
2 chr4:148997800-149028800 Weak transcription Pancreas Pancrea
3 chr4:148998400-149032600 Weak transcription Primary B cells from peripheral blood blood
4 chr4:148999200-149029600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
5 chr4:148999600-149024400 Weak transcription Rectal Smooth Muscle rectum
6 chr4:149002200-149029400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr4:149002600-149036600 Weak transcription Placenta Amnion Placenta Amnion
8 chr4:149003000-149028800 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr4:149003000-149029200 Weak transcription Primary T helper cells fromperipheralblood blood
10 chr4:149003200-149025400 Weak transcription Primary T cells fromperipheralblood blood
11 chr4:149003400-149027200 Weak transcription Fetal Intestine Large intestine
12 chr4:149003800-149029400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
13 chr4:149004000-149029200 Weak transcription Primary T helper cells PMA-I stimulated --
14 chr4:149004600-149052400 Weak transcription Esophagus oesophagus
15 chr4:149012600-149029600 Weak transcription Colonic Mucosa Colon
16 chr4:149012600-149037400 Weak transcription NHLF lung
17 chr4:149013000-149024400 Weak transcription Gastric stomach
18 chr4:149013200-149034800 Weak transcription Brain Angular Gyrus brain
19 chr4:149013400-149025600 Weak transcription Adipose Nuclei Adipose
20 chr4:149013400-149028800 Weak transcription Brain Inferior Temporal Lobe brain
21 chr4:149013600-149029400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr4:149013600-149034600 Weak transcription Brain Hippocampus Middle brain
23 chr4:149014200-149023000 Weak transcription Duodenum Mucosa Duodenum
24 chr4:149014400-149023400 Weak transcription Fetal Intestine Small intestine
25 chr4:149014400-149029600 Weak transcription Spleen Spleen
26 chr4:149014600-149023200 Weak transcription Fetal Stomach stomach
27 chr4:149014600-149029400 Weak transcription Fetal Muscle Trunk muscle
28 chr4:149014600-149029400 Weak transcription Lung lung
29 chr4:149015200-149023000 Weak transcription Stomach Smooth Muscle stomach
30 chr4:149015400-149029600 Weak transcription Skeletal Muscle Female skeletal muscle
31 chr4:149015600-149023200 Weak transcription Skeletal Muscle Male skeletal muscle
32 chr4:149015600-149037600 Weak transcription Colon Smooth Muscle Colon
33 chr4:149016600-149026400 Strong transcription Rectal Mucosa Donor 31 rectum
34 chr4:149017000-149023400 Weak transcription Right Ventricle heart
35 chr4:149017000-149023600 Weak transcription Left Ventricle heart
36 chr4:149017000-149029800 Weak transcription Ovary ovary
37 chr4:149018000-149085800 Weak transcription Stomach Mucosa stomach
38 chr4:149019600-149023800 Weak transcription Fetal Muscle Leg muscle
39 chr4:149020000-149023000 Weak transcription Breast Myoepithelial Primary Cells Breast
40 chr4:149020400-149023400 Weak transcription Sigmoid Colon Sigmoid Colon
41 chr4:149020400-149024000 Weak transcription Fetal Heart heart
42 chr4:149020600-149023000 Weak transcription Rectal Mucosa Donor 29 rectum
43 chr4:149020600-149029800 Weak transcription Aorta Aorta
44 chr4:149020800-149042400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
45 chr4:149021000-149023600 Weak transcription Primary T helper naive cells fromperipheralblood blood
46 chr4:149022200-149023400 Enhancers Pancreatic Islets Pancreatic Islet
47 chr4:149022200-149024400 Strong transcription Liver Liver
48 chr4:149022400-149042600 Weak transcription Small Intestine intestine
49 chr4:149022600-149023200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr4:149022600-149023400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived

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Last update: Aug 31, 2015