Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10857123	0.95[EUR][1000 genomes]
rs13107241	0.83[EUR][1000 genomes]
rs13122080	0.81[EUR][1000 genomes]
rs13123189	0.85[EUR][1000 genomes]
rs13127462	0.94[EUR][1000 genomes]
rs13130460	0.83[EUR][1000 genomes]
rs13131457	0.82[EUR][1000 genomes]
rs13135599	0.94[EUR][1000 genomes]
rs13135955	0.94[EUR][1000 genomes]
rs13141779	0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs17012108	0.95[EUR][1000 genomes]
rs35899860	0.91[EUR][1000 genomes]
rs4833369	0.84[EUR][1000 genomes]
rs4834179	0.85[EUR][1000 genomes]
rs4834180	0.95[EUR][1000 genomes]
rs6823821	0.83[EUR][1000 genomes]
rs7658955	0.92[EUR][1000 genomes]
rs7659106	0.91[EUR][1000 genomes]
rs7682967	0.95[EUR][1000 genomes]
rs7683191	0.95[EUR][1000 genomes]
rs7683469	0.95[EUR][1000 genomes]
rs899933	0.91[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv879914	chr4:128005362-128123638	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:128040600-128046400	Weak transcription	HUES48 Cell Line	embryonic stem cell
2	chr4:128042000-128046000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
3	chr4:128042000-128046200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr4:128042000-128047600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
5	chr4:128042200-128046400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
6	chr4:128044800-128045800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
7	chr4:128045000-128046400	Weak transcription	H1 Cell Line	embryonic stem cell

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