Variant report

Variant rs1315353
Chromosome Location chr12:38164875-38164876
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:38162600-38165400 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
2 chr12:38162600-38167800 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
3 chr12:38162600-38170600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr12:38163800-38165400 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
5 chr12:38164400-38165000 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
6 chr12:38164600-38165000 ZNF genes & repeats ES-I3 Cell Line embryonic stem cell
7 chr12:38164600-38165000 ZNF genes & repeats H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr12:38164600-38165000 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
9 chr12:38164600-38165000 ZNF genes & repeats hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr12:38164600-38165000 ZNF genes & repeats iPS-15b Cell Line embryonic stem cell
11 chr12:38164600-38165000 ZNF genes & repeats iPS-18 Cell Line embryonic stem cell
12 chr12:38164600-38165000 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
13 chr12:38164600-38165000 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr12:38164600-38165000 ZNF genes & repeats Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr12:38164600-38165000 Flanking Bivalent TSS/Enh Primary T helper naive cells from peripheral blood blood
16 chr12:38164600-38165000 Bivalent/Poised TSS Primary T helper naive cells fromperipheralblood blood
17 chr12:38164600-38165000 ZNF genes & repeats Primary T helper memory cells from peripheral blood 1 blood
18 chr12:38164600-38165000 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
19 chr12:38164600-38165000 ZNF genes & repeats Primary T helper 17 cells PMA-I stimulated --
20 chr12:38164600-38165000 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
21 chr12:38164600-38165000 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
22 chr12:38164600-38165000 ZNF genes & repeats Primary T cells effector/memory enriched fromperipheralblood blood
23 chr12:38164600-38165000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr12:38164600-38165000 ZNF genes & repeats Muscle Satellite Cultured Cells --
25 chr12:38164600-38165000 Flanking Active TSS Aorta Aorta
26 chr12:38164600-38165000 ZNF genes & repeats Liver Liver
27 chr12:38164600-38165000 ZNF genes & repeats Brain Anterior Caudate brain
28 chr12:38164600-38165000 ZNF genes & repeats Brain Hippocampus Middle brain
29 chr12:38164600-38165000 ZNF genes & repeats Brain Inferior Temporal Lobe brain
30 chr12:38164600-38165000 ZNF genes & repeats Brain Dorsolateral Prefrontal Cortex brain
31 chr12:38164600-38165000 ZNF genes & repeats Brain Substantia Nigra brain
32 chr12:38164600-38165000 Flanking Bivalent TSS/Enh Colonic Mucosa Colon
33 chr12:38164600-38165000 ZNF genes & repeats Colon Smooth Muscle Colon
34 chr12:38164600-38165000 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
35 chr12:38164600-38165000 ZNF genes & repeats Fetal Lung lung
36 chr12:38164600-38165000 ZNF genes & repeats Gastric stomach
37 chr12:38164600-38165000 ZNF genes & repeats Left Ventricle heart
38 chr12:38164600-38165000 Active TSS Ovary ovary
39 chr12:38164600-38165000 ZNF genes & repeats Pancreas Pancrea
40 chr12:38164600-38165000 ZNF genes & repeats Psoas Muscle Psoas
41 chr12:38164600-38165000 ZNF genes & repeats Rectal Smooth Muscle rectum
42 chr12:38164600-38165000 Active TSS Right Atrium heart
43 chr12:38164600-38165000 ZNF genes & repeats Sigmoid Colon Sigmoid Colon
44 chr12:38164600-38165000 ZNF genes & repeats Small Intestine intestine
45 chr12:38164600-38165000 ZNF genes & repeats GM12878-XiMat blood
46 chr12:38164600-38165000 ZNF genes & repeats HUVEC blood vessel
47 chr12:38164600-38165200 ZNF genes & repeats H1 Cell Line embryonic stem cell
48 chr12:38164600-38165200 ZNF genes & repeats Adipose Nuclei Adipose
49 chr12:38164600-38165200 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
50 chr12:38164600-38165400 ZNF genes & repeats HepG2 liver

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