Variant report

Variant rs13155998
Chromosome Location chr5:80444199-80444200
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:34 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:80410600-80446600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr5:80423000-80451400 Weak transcription Primary T killer naive cells fromperipheralblood blood
3 chr5:80424400-80445000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
4 chr5:80436800-80448600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr5:80437400-80447000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
6 chr5:80438800-80445800 Weak transcription Fetal Muscle Leg muscle
7 chr5:80438800-80446600 Weak transcription Fetal Stomach stomach
8 chr5:80441600-80444400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
9 chr5:80441800-80446600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr5:80442200-80460800 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr5:80442200-80465600 Weak transcription HepG2 liver
12 chr5:80443400-80444400 Enhancers Cortex derived primary cultured neurospheres brain
13 chr5:80443400-80444400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
14 chr5:80443400-80444400 Enhancers HSMMtube muscle
15 chr5:80443600-80444200 Enhancers Primary T helper naive cells from peripheral blood blood
16 chr5:80443600-80444200 Flanking Active TSS Dnd41 blood
17 chr5:80443600-80444400 Active TSS Primary T helper naive cells fromperipheralblood blood
18 chr5:80443600-80444400 Enhancers Brain Hippocampus Middle brain
19 chr5:80443800-80444200 Active TSS Primary T cells fromperipheralblood blood
20 chr5:80443800-80444200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
21 chr5:80443800-80444400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
22 chr5:80443800-80444400 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
23 chr5:80443800-80444400 Active TSS Primary T killer memory cells from peripheral blood blood
24 chr5:80443800-80444400 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr5:80443800-80444400 Active TSS Thymus Thymus
26 chr5:80444000-80444200 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr5:80444000-80444200 Flanking Active TSS Primary T cells from cord blood blood
28 chr5:80444000-80444400 Enhancers iPS-18 Cell Line embryonic stem cell
29 chr5:80444000-80444400 Active TSS Primary T helper cells PMA-I stimulated --
30 chr5:80444000-80444400 Active TSS Primary T helper cells fromperipheralblood blood
31 chr5:80444000-80444400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr5:80444000-80444400 Bivalent Enhancer NHDF-Ad bronchial
33 chr5:80444000-80451400 Weak transcription Ovary ovary
34 chr5:80444000-80457000 Weak transcription Brain Cingulate Gyrus brain

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