Variant report

Variant	rs13164150
Chromosome Location	chr5:60848204-60848205
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs11741726	0.82[ASN][1000 genomes]
rs13165663	0.82[ASN][1000 genomes]
rs13167695	0.82[ASN][1000 genomes]
rs13168452	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs13170519	0.82[ASN][1000 genomes]
rs13190437	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs17338553	0.82[ASN][1000 genomes]
rs17340123	0.80[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4582229	1.00[CHB][hapmap];0.88[JPT][hapmap];0.88[YRI][hapmap];0.95[ASN][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:60839000-60850000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr5:60840200-60852200	Weak transcription	Left Ventricle	heart
3	chr5:60843000-60848400	Weak transcription	HSMMtube	muscle
4	chr5:60844000-60850800	Weak transcription	NHLF	lung
5	chr5:60844400-60850400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr5:60847800-60848400	Enhancers	Brain Anterior Caudate	brain
7	chr5:60847800-60848800	Enhancers	Brain Hippocampus Middle	brain
8	chr5:60848200-60848800	Enhancers	Fetal Heart	heart

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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