Variant report

Variant rs13198484
Chromosome Location chr6:56812717-56812718
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:31 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:56804200-56813000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr6:56804200-56818000 Weak transcription HSMM muscle
3 chr6:56804400-56813600 Weak transcription A549 lung
4 chr6:56804400-56814600 Weak transcription Muscle Satellite Cultured Cells --
5 chr6:56804400-56815800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
6 chr6:56806600-56817800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
7 chr6:56806600-56818000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr6:56806600-56818400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr6:56807000-56812800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
10 chr6:56807000-56813000 Weak transcription NHLF lung
11 chr6:56809600-56813200 Strong transcription NHDF-Ad bronchial
12 chr6:56809800-56813000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr6:56810000-56818200 Weak transcription Primary hematopoietic stem cells short term culture blood
14 chr6:56810200-56814600 Weak transcription HUVEC blood vessel
15 chr6:56810800-56813000 Weak transcription HUES64 Cell Line embryonic stem cell
16 chr6:56811000-56814800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
17 chr6:56811200-56814600 Weak transcription K562 blood
18 chr6:56811400-56813800 Weak transcription HUES48 Cell Line embryonic stem cell
19 chr6:56811400-56815600 Weak transcription GM12878-XiMat blood
20 chr6:56811600-56813800 Weak transcription NH-A brain
21 chr6:56812200-56813600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr6:56812400-56812800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr6:56812400-56813000 Enhancers Hela-S3 cervix
24 chr6:56812400-56813400 Enhancers NHEK skin
25 chr6:56812400-56813600 Enhancers HMEC breast
26 chr6:56812400-56814000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr6:56812400-56815400 Weak transcription Brain Anterior Caudate brain
28 chr6:56812600-56813600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr6:56812600-56814800 Genic enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr6:56812600-56816200 Genic enhancers Osteobl bone
31 chr6:56812600-56817400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived

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