Variant report

Variant rs6927558
Chromosome Location chr6:56813806-56813807
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:33 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:56804200-56818000 Weak transcription HSMM muscle
2 chr6:56804400-56814600 Weak transcription Muscle Satellite Cultured Cells --
3 chr6:56804400-56815800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
4 chr6:56806600-56817800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
5 chr6:56806600-56818000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr6:56806600-56818400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr6:56810000-56818200 Weak transcription Primary hematopoietic stem cells short term culture blood
8 chr6:56810200-56814600 Weak transcription HUVEC blood vessel
9 chr6:56811000-56814800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
10 chr6:56811200-56814600 Weak transcription K562 blood
11 chr6:56811400-56815600 Weak transcription GM12878-XiMat blood
12 chr6:56812400-56814000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr6:56812400-56815400 Weak transcription Brain Anterior Caudate brain
14 chr6:56812600-56814800 Genic enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr6:56812600-56816200 Genic enhancers Osteobl bone
16 chr6:56812600-56817400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
17 chr6:56812800-56814000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
18 chr6:56812800-56816000 Genic enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr6:56813000-56814000 Strong transcription NHLF lung
20 chr6:56813000-56814200 Strong transcription HUES64 Cell Line embryonic stem cell
21 chr6:56813000-56817400 Weak transcription Hela-S3 cervix
22 chr6:56813200-56814400 Genic enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr6:56813200-56816000 Genic enhancers NHDF-Ad bronchial
24 chr6:56813200-56818200 Weak transcription HSMMtube muscle
25 chr6:56813400-56815800 Weak transcription NHEK skin
26 chr6:56813400-56816200 Enhancers Fetal Adrenal Gland Adrenal Gland
27 chr6:56813600-56814000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr6:56813600-56815400 Strong transcription A549 lung
29 chr6:56813600-56817000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr6:56813600-56817600 Weak transcription HMEC breast
31 chr6:56813800-56816000 Strong transcription HUES48 Cell Line embryonic stem cell
32 chr6:56813800-56816800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
33 chr6:56813800-56816800 Enhancers NH-A brain

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