The 2.0 version of rSNPBase

Variant report

Variant rs13213527
Chromosome Location chr6:118937758-118937759
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:118902200-118939800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
2 chr6:118912200-118939000 Weak transcription Brain Inferior Temporal Lobe brain
3 chr6:118912200-118966200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
4 chr6:118913000-118940200 Weak transcription Ovary ovary
5 chr6:118920800-118951200 Weak transcription HSMM muscle
6 chr6:118923000-118939000 Weak transcription Right Ventricle heart
7 chr6:118925000-118938800 Weak transcription Primary T regulatory cells fromperipheralblood blood
8 chr6:118925000-118945000 Weak transcription Primary B cells from cord blood blood
9 chr6:118925400-118938400 Weak transcription K562 blood
10 chr6:118926400-118940000 Weak transcription Monocytes-CD14+_RO01746 blood
11 chr6:118926600-118939800 Weak transcription Left Ventricle heart
12 chr6:118926600-118947000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr6:118927000-118965000 Weak transcription NHLF lung
14 chr6:118928000-118952000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
15 chr6:118928200-118939800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
16 chr6:118928400-118939800 Weak transcription Primary T killer memory cells from peripheral blood blood
17 chr6:118928800-118951800 Weak transcription Sigmoid Colon Sigmoid Colon
18 chr6:118928800-118951800 Weak transcription Spleen Spleen
19 chr6:118929200-118947000 Weak transcription Thymus Thymus
20 chr6:118930200-118939800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr6:118931200-118939800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
22 chr6:118931600-118939800 Weak transcription Primary T helper naive cells from peripheral blood blood
23 chr6:118931600-118970400 Weak transcription NH-A brain
24 chr6:118931800-118939800 Weak transcription Gastric stomach
25 chr6:118932000-118939600 Weak transcription Primary T helper naive cells fromperipheralblood blood
26 chr6:118932200-118939800 Weak transcription Primary T killer naive cells fromperipheralblood blood
27 chr6:118932800-118943000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr6:118933200-118940400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr6:118933400-118938400 Weak transcription Fetal Lung lung
30 chr6:118933400-118939600 Weak transcription Primary T helper cells fromperipheralblood blood
31 chr6:118933400-118940000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
32 chr6:118933600-118939800 Weak transcription Primary B cells from peripheral blood blood
33 chr6:118933600-118946800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr6:118934400-118938400 Weak transcription Primary hematopoietic stem cells short term culture blood
35 chr6:118934400-118938800 Weak transcription Fetal Thymus thymus
36 chr6:118934400-118939000 Weak transcription Primary T cells fromperipheralblood blood
37 chr6:118934400-118940200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
38 chr6:118935400-118939600 Strong transcription Primary T cells from cord blood blood
39 chr6:118935600-118939000 Weak transcription Cortex derived primary cultured neurospheres brain
40 chr6:118935600-118951400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
41 chr6:118935800-118939800 Weak transcription GM12878-XiMat blood
42 chr6:118936200-118939800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr6:118936600-118937800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
44 chr6:118936600-118939800 Weak transcription HMEC breast
45 chr6:118936800-118937800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
46 chr6:118936800-118937800 Enhancers Skeletal Muscle Female skeletal muscle
47 chr6:118936800-118939800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
48 chr6:118937000-118938600 Weak transcription Skeletal Muscle Male skeletal muscle
49 chr6:118937000-118938800 Weak transcription Fetal Brain Female brain
50 chr6:118937000-118938800 Weak transcription Fetal Stomach stomach

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Last update: Aug 31, 2015