Variant report

Variant rs9489449
Chromosome Location chr6:118901867-118901868
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:118894200-118902400 ZNF genes & repeats Primary B cells from peripheral blood blood
2 chr6:118894400-118904200 ZNF genes & repeats Dnd41 blood
3 chr6:118894800-118902600 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
4 chr6:118895000-118902000 ZNF genes & repeats Primary T helper naive cells fromperipheralblood blood
5 chr6:118895200-118902000 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
6 chr6:118895200-118902000 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
7 chr6:118895200-118902800 ZNF genes & repeats Thymus Thymus
8 chr6:118895200-118903200 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
9 chr6:118895800-118911400 Weak transcription Right Ventricle heart
10 chr6:118896000-118909400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr6:118896200-118902600 Weak transcription Gastric stomach
12 chr6:118896200-118910000 Weak transcription Brain Inferior Temporal Lobe brain
13 chr6:118896800-118902400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr6:118897400-118902200 ZNF genes & repeats Fetal Thymus thymus
15 chr6:118899000-118902400 ZNF genes & repeats Primary T helper naive cells from peripheral blood blood
16 chr6:118899600-118902600 Weak transcription NHLF lung
17 chr6:118900400-118902200 Weak transcription ES-I3 Cell Line embryonic stem cell
18 chr6:118900400-118902600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr6:118900400-118910200 Weak transcription Fetal Lung lung
20 chr6:118900400-118911200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
21 chr6:118900800-118902800 ZNF genes & repeats Primary hematopoietic stem cells blood
22 chr6:118901000-118902200 ZNF genes & repeats Primary mononuclear cells fromperipheralblood Blood
23 chr6:118901000-118902200 Enhancers Brain Substantia Nigra brain
24 chr6:118901000-118902200 ZNF genes & repeats Fetal Stomach stomach
25 chr6:118901000-118926200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr6:118901200-118902200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr6:118901200-118903000 Weak transcription Primary B cells from cord blood blood
28 chr6:118901400-118908000 Enhancers Psoas Muscle Psoas
29 chr6:118901400-118913000 Weak transcription Primary T killer naive cells fromperipheralblood blood
30 chr6:118901600-118902000 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr6:118901600-118902000 Enhancers Left Ventricle heart
32 chr6:118901600-118902200 Enhancers Pancreas Pancrea
33 chr6:118901600-118903200 Enhancers HMEC breast
34 chr6:118901600-118903800 Enhancers Osteobl bone
35 chr6:118901600-118904200 Enhancers Skeletal Muscle Male skeletal muscle
36 chr6:118901600-118904400 Enhancers Primary monocytes fromperipheralblood blood
37 chr6:118901600-118904400 Enhancers Monocytes-CD14+_RO01746 blood
38 chr6:118901600-118906400 Enhancers Fetal Adrenal Gland Adrenal Gland
39 chr6:118901600-118912000 Strong transcription Primary T cells from cord blood blood
40 chr6:118901800-118902000 Enhancers HUES48 Cell Line embryonic stem cell
41 chr6:118901800-118902000 Weak transcription Primary T cells fromperipheralblood blood
42 chr6:118901800-118902000 Enhancers Aorta Aorta
43 chr6:118901800-118902200 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr6:118901800-118902200 Enhancers Primary Natural Killer cells fromperipheralblood blood
45 chr6:118901800-118902200 Enhancers Liver Liver
46 chr6:118901800-118902200 Enhancers Brain Angular Gyrus brain
47 chr6:118901800-118902200 Flanking Active TSS Brain Anterior Caudate brain
48 chr6:118901800-118902200 Enhancers Brain Cingulate Gyrus brain
49 chr6:118901800-118902200 Enhancers Fetal Brain Male brain
50 chr6:118901800-118902200 Enhancers Ovary ovary

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