Variant report

Variant	rs13215538
Chromosome Location	chr6:163037975-163037976
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 208 )
Associated
traits (count: 4 )

rSNPs within LD-proxies of this variant (count:124)

rs_ID	r²[population]
rs13190742	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs13191362	1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs13192618	0.85[CEU][hapmap];1.00[YRI][hapmap];0.86[EUR][1000 genomes]
rs13192894	0.89[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13193282	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs13195226	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs13196631	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs13199223	0.95[CEU][hapmap];0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs13200053	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs13200329	0.81[EUR][1000 genomes]
rs13201023	0.95[CEU][hapmap];0.82[AMR][1000 genomes]
rs13202339	0.89[CEU][hapmap];1.00[YRI][hapmap]
rs13204013	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs13204087	0.82[AMR][1000 genomes]
rs13204439	0.95[CEU][hapmap];0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs13207239	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs13207671	0.95[CEU][hapmap]
rs13208136	0.86[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs13208970	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs13209100	0.89[CEU][hapmap];0.91[EUR][1000 genomes]
rs13209728	0.95[CEU][hapmap]
rs13209994	0.82[AMR][1000 genomes]
rs13210412	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs13210756	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs13212137	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs13212608	0.95[CEU][hapmap];0.88[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs13213408	0.95[CEU][hapmap];0.82[AMR][1000 genomes]
rs13213746	0.89[EUR][1000 genomes]
rs13214516	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs13215491	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs13215748	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs13218900	1.00[CEU][hapmap];1.00[YRI][hapmap]
rs13219926	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs13220048	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs13220181	0.81[EUR][1000 genomes]
rs2156257	0.89[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs2187194	0.88[AFR][1000 genomes];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs28360532	0.82[AMR][1000 genomes]
rs28360533	0.82[AMR][1000 genomes]
rs34009353	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs34035978	0.91[EUR][1000 genomes]
rs34052221	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs34063386	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs34066731	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs34138336	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs34177053	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs34192365	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs34228197	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs34306375	0.82[AMR][1000 genomes]
rs34344906	0.82[AMR][1000 genomes]
rs34347104	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs34520442	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs34549249	0.86[AMR][1000 genomes]
rs34591938	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs34592354	0.86[EUR][1000 genomes]
rs34594856	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs34619021	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs34637087	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs34653853	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs34697913	0.82[AMR][1000 genomes]
rs34709632	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs34714603	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs34725898	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs34773528	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs34918316	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs34931503	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs35017019	0.82[AMR][1000 genomes]
rs35044651	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs35092540	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs35126854	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs35378894	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs35383933	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs35395472	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs35424047	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs35443919	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35449999	0.88[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs35509380	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35518396	0.81[EUR][1000 genomes]
rs35537826	0.90[EUR][1000 genomes]
rs35575481	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs35723993	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs35760705	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs35818596	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs35820211	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35911566	0.82[AMR][1000 genomes]
rs35942036	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs36007635	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs36042757	0.81[EUR][1000 genomes]
rs36113695	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs4260737	0.80[CEU][hapmap];0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs4489133	0.93[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs55822577	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs55847707	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs56263105	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs59067610	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs60719662	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs66534429	0.81[EUR][1000 genomes]
rs66789102	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs66921603	0.82[AMR][1000 genomes]
rs67025553	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs67042566	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs67046187	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs67084568	0.82[AMR][1000 genomes]
rs67094146	0.93[EUR][1000 genomes]
rs67487119	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs67646369	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs67673890	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs67747005	0.91[EUR][1000 genomes]
rs67840803	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs68045643	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs68144677	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs71551179	0.82[AMR][1000 genomes]
rs71567659	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs73008453	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs73008456	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs73016459	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73020362	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs73035006	0.82[AMR][1000 genomes]
rs73035012	0.82[AMR][1000 genomes]
rs73035021	0.82[AMR][1000 genomes]
rs73035023	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs73035025	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs7764785	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs7769048	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:84 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1029592	chr6:162442882-163059427	Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv517562	chr6:162481460-163249645	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
3	nsv1035088	chr6:162482580-163072138	Enhancers Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	nsv1018554	chr6:162482580-163161112	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
5	nsv533215	chr6:162507055-163241611	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Bivalent Enhancer Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
6	nsv1028092	chr6:162519281-163194121	Weak transcription Active TSS Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
7	nsv538506	chr6:162519281-163194121	Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Strong transcription Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
8	nsv481689	chr6:162532062-163065341	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
9	nsv917422	chr6:162541151-163050543	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
10	nsv533928	chr6:162541352-163050403	Enhancers Weak transcription Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
11	nsv817484	chr6:162541352-163089403	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
12	nsv1029151	chr6:162582178-163125954	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
13	nsv1033730	chr6:162582382-163095834	Flanking Active TSS Enhancers Weak transcription Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
14	nsv533366	chr6:162584320-163241000	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
15	nsv1025396	chr6:162590018-163183563	Enhancers Flanking Active TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
16	nsv464094	chr6:162597952-163107097	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
17	nsv605112	chr6:162597952-163107097	Enhancers Strong transcription Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
18	nsv481709	chr6:162611340-163119381	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
19	nsv1020023	chr6:162617012-163070805	Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
20	nsv531338	chr6:162617031-163114036	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
21	nsv870232	chr6:162640581-163315481	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
22	nsv1024378	chr6:162643449-163161112	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
23	nsv1021704	chr6:162643449-163235776	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
24	nsv538509	chr6:162643449-163235776	Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
25	nsv917926	chr6:162646457-163609259	Enhancers Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
26	nsv916988	chr6:162654003-163050400	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
27	nsv497870	chr6:162654003-163129645	Weak transcription Enhancers Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
28	nsv533843	chr6:162654091-163241043	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Strong transcription Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
29	nsv1028992	chr6:162659036-163070805	Enhancers Flanking Active TSS Genic enhancers Weak transcription Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
30	nsv464098	chr6:162661990-163045463	Flanking Active TSS Enhancers Weak transcription Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
31	nsv605122	chr6:162661990-163045463	Flanking Active TSS Enhancers Weak transcription Strong transcription Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
32	nsv481691	chr6:162663702-163108515	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
33	nsv1016439	chr6:162676193-163078242	Weak transcription Flanking Active TSS Enhancers Strong transcription ZNF genes & repeats Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
34	nsv933247	chr6:162683725-163107590	Weak transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
35	nsv481690	chr6:162690614-163087322	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
36	nsv481688	chr6:162729263-163050636	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
37	nsv1024598	chr6:162740393-163042505	Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Active TSS Genic enhancers Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
38	nsv538515	chr6:162740393-163042505	Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
39	nsv1018661	chr6:162740393-163095834	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
40	nsv538516	chr6:162740393-163095834	Enhancers Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
41	nsv1020080	chr6:162745568-163039183	Enhancers Strong transcription Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
42	nsv533307	chr6:162748246-163050400	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Bivalent/Poised TSS Strong transcription Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
43	nsv1018904	chr6:162748287-163129724	Enhancers Weak transcription Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
44	nsv538517	chr6:162748287-163129724	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
45	nsv1030546	chr6:162748287-163475085	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
46	nsv538518	chr6:162748287-163475085	Transcr. at gene 5' and 3' Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Strong transcription ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
47	nsv464114	chr6:162757114-163044126	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
48	nsv605151	chr6:162757114-163044126	Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Bivalent/Poised TSS Strong transcription Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
49	nsv1023779	chr6:162780855-163042505	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
50	nsv538520	chr6:162780855-163042505	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

mRNA abundance (count:4)

SNP	Gene	Cis/trans	Tissue	Source
rs13215538	PACRG	cis	Esophagus Muscularis	GTEx
rs13215538	PACRG	cis	Artery Aorta	GTEx
rs13215538	PACRG	cis	Artery Tibial	GTEx
rs13215538	PACRG	cis	Thyroid	GTEx

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:163025400-163043400	Weak transcription	Psoas Muscle	Psoas
2	chr6:163036800-163042400	Weak transcription	Skeletal Muscle Female	skeletal muscle
3	chr6:163037000-163042200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr6:163037200-163039200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr6:163037600-163038600	Enhancers	Duodenum Mucosa	Duodenum

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