Variant report

Variant rs13217077
Chromosome Location chr6:5217068-5217069
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:5176200-5239600 Weak transcription Thymus Thymus
2 chr6:5194000-5220800 Weak transcription GM12878-XiMat blood
3 chr6:5205600-5218800 Weak transcription iPS-15b Cell Line embryonic stem cell
4 chr6:5205600-5220000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr6:5205600-5223000 Weak transcription Right Atrium heart
6 chr6:5206200-5246800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
7 chr6:5206400-5219400 Weak transcription HMEC breast
8 chr6:5206600-5240800 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr6:5206800-5217400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
10 chr6:5206800-5221000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr6:5206800-5232400 Weak transcription Psoas Muscle Psoas
12 chr6:5207000-5231000 Weak transcription ES-I3 Cell Line embryonic stem cell
13 chr6:5208200-5259800 Weak transcription Primary B cells from peripheral blood blood
14 chr6:5208400-5231400 Weak transcription Brain Anterior Caudate brain
15 chr6:5208400-5239800 Weak transcription Liver Liver
16 chr6:5208800-5231000 Weak transcription Brain Angular Gyrus brain
17 chr6:5210000-5230400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr6:5212600-5218200 Strong transcription Primary T cells from cord blood blood
19 chr6:5212600-5230800 Weak transcription Primary T regulatory cells fromperipheralblood blood
20 chr6:5213800-5219600 Weak transcription Ovary ovary
21 chr6:5214200-5218400 Weak transcription HUES48 Cell Line embryonic stem cell
22 chr6:5214200-5219400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr6:5214200-5223600 Weak transcription Fetal Brain Male brain
24 chr6:5214200-5231600 Weak transcription iPS-18 Cell Line embryonic stem cell
25 chr6:5214400-5219200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr6:5214400-5220400 Weak transcription H1 Cell Line embryonic stem cell
27 chr6:5214400-5223800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr6:5214600-5223600 Weak transcription NH-A brain
29 chr6:5214600-5241000 Weak transcription Brain Germinal Matrix brain
30 chr6:5214600-5248800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr6:5214800-5217400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
32 chr6:5214800-5217600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
33 chr6:5214800-5222800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
34 chr6:5214800-5231600 Weak transcription iPS-20b Cell Line embryonic stem cell
35 chr6:5214800-5248800 Weak transcription A549 lung
36 chr6:5215000-5217400 Weak transcription Cortex derived primary cultured neurospheres brain
37 chr6:5215000-5219400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr6:5215000-5220600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr6:5215000-5241400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
40 chr6:5215000-5244800 Weak transcription Gastric stomach
41 chr6:5215000-5252600 Weak transcription Stomach Smooth Muscle stomach
42 chr6:5215000-5257400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
43 chr6:5215000-5259800 Weak transcription Primary T cells fromperipheralblood blood
44 chr6:5215200-5217600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
45 chr6:5215200-5217600 Weak transcription Spleen Spleen
46 chr6:5215200-5219400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
47 chr6:5215200-5219400 Weak transcription Duodenum Smooth Muscle Duodenum
48 chr6:5215200-5219600 Weak transcription NHEK skin
49 chr6:5215200-5224800 Weak transcription Fetal Thymus thymus
50 chr6:5215200-5227400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain

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