Variant report

Variant rs1323259
Chromosome Location chr9:697252-697253
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:653400-698000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr9:670800-706800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr9:688400-698000 Weak transcription Gastric stomach
4 chr9:690800-700600 Weak transcription Small Intestine intestine
5 chr9:691000-698400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
6 chr9:691200-706600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr9:692000-697400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
8 chr9:692000-698800 Enhancers Breast Myoepithelial Primary Cells Breast
9 chr9:692200-697600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr9:693600-697400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr9:693800-700400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
12 chr9:693800-700400 Weak transcription iPS-15b Cell Line embryonic stem cell
13 chr9:693800-700600 Weak transcription H9 Cell Line embryonic stem cell
14 chr9:694000-698000 Weak transcription HUES48 Cell Line embryonic stem cell
15 chr9:694000-698200 Weak transcription H1 Cell Line embryonic stem cell
16 chr9:694200-698400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr9:694400-698200 Weak transcription iPS-18 Cell Line embryonic stem cell
18 chr9:694400-699600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr9:694600-698400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr9:694600-699000 Enhancers Fetal Heart heart
21 chr9:694800-698000 Weak transcription iPS-20b Cell Line embryonic stem cell
22 chr9:694800-698200 Enhancers Psoas Muscle Psoas
23 chr9:694800-698200 Enhancers HMEC breast
24 chr9:694800-699200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
25 chr9:694800-700200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
26 chr9:694800-701600 Enhancers Cortex derived primary cultured neurospheres brain
27 chr9:695000-698400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr9:695000-706800 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr9:695200-697400 Enhancers Fetal Muscle Leg muscle
30 chr9:695200-698600 Enhancers Liver Liver
31 chr9:695200-700600 Enhancers Rectal Smooth Muscle rectum
32 chr9:695200-706000 Weak transcription Fetal Kidney kidney
33 chr9:695200-706800 Weak transcription Spleen Spleen
34 chr9:695400-697800 Enhancers Left Ventricle heart
35 chr9:695400-698200 Weak transcription HUES64 Cell Line embryonic stem cell
36 chr9:695400-699000 Enhancers Osteobl bone
37 chr9:695400-699600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
38 chr9:695400-699600 Enhancers NHLF lung
39 chr9:695400-700000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
40 chr9:695400-700600 Weak transcription Primary hematopoietic stem cells short term culture blood
41 chr9:695600-697400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
42 chr9:695600-699200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr9:695600-699800 Enhancers Brain Angular Gyrus brain
44 chr9:695600-701200 Enhancers Brain Substantia Nigra brain
45 chr9:695800-697800 Enhancers HepG2 liver
46 chr9:695800-700000 Weak transcription Fetal Intestine Small intestine
47 chr9:695800-701800 Enhancers Brain Cingulate Gyrus brain
48 chr9:695800-706400 Weak transcription Colonic Mucosa Colon
49 chr9:696000-698400 Enhancers Brain Hippocampus Middle brain
50 chr9:696000-699000 Enhancers Colon Smooth Muscle Colon

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