Variant report

Variant	rs13233424
Chromosome Location	chr7:127123507-127123508
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs11975345	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13235029	0.88[AFR][1000 genomes]
rs62468936	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6949899	0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6957054	0.88[AFR][1000 genomes]
rs6965137	0.82[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6967546	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:127111000-127125000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr7:127119200-127124400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr7:127119600-127124600	Weak transcription	Primary T helper cells PMA-I stimulated	--
4	chr7:127119600-127125200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
5	chr7:127119800-127124600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
6	chr7:127123400-127125200	Weak transcription	Gastric	stomach

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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