Variant report

Variant	rs6957054
Chromosome Location	chr7:127115954-127115955
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr7:127113557..127116124-chr7:127116757..127118355,2	K562	blood:
2	chr7:127114890..127116879-chr7:127201699..127204076,2	K562	blood:
3	chr7:126920847..126923556-chr7:127113482..127116443,2	K562	blood:

Variant related genes	Relation type
ENSG00000226770	Chromatin interaction

Extended variants
information (count: 38 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:38)

rs_ID	r²[population]
rs10487484	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10487494	0.92[ASN][1000 genomes]
rs11975345	0.83[AFR][1000 genomes]
rs12536698	0.92[ASN][1000 genomes]
rs12706803	0.82[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13227138	0.92[ASN][1000 genomes]
rs13233424	0.88[AFR][1000 genomes]
rs13235029	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13244426	0.92[ASN][1000 genomes]
rs13244709	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs13247976	0.92[ASN][1000 genomes]
rs13309235	0.80[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1419408	0.80[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17660187	0.92[ASN][1000 genomes]
rs2272374	0.82[ASN][1000 genomes]
rs33973710	0.89[ASN][1000 genomes]
rs34121113	0.82[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34195583	0.82[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34211107	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs34365152	0.92[ASN][1000 genomes]
rs34388330	0.92[ASN][1000 genomes]
rs34599926	0.89[ASN][1000 genomes]
rs34814259	0.82[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34881339	0.80[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs35120956	0.89[ASN][1000 genomes]
rs35144279	0.84[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35528098	0.92[ASN][1000 genomes]
rs35872516	0.89[ASN][1000 genomes]
rs3752619	0.86[ASN][1000 genomes]
rs3757785	0.82[ASN][1000 genomes]
rs3808111	0.89[ASN][1000 genomes]
rs3808115	0.86[ASN][1000 genomes]
rs58451280	0.89[ASN][1000 genomes]
rs62468943	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs62483172	0.92[ASN][1000 genomes]
rs6964793	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs746238	0.89[ASN][1000 genomes]
rs7811506	0.89[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:127097400-127116000	Weak transcription	Pancreas	Pancrea
2	chr7:127111000-127125000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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