Variant report

Variant	rs34195583
Chromosome Location	chr7:127118675-127118676
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:37)

rs_ID	r²[population]
rs10487484	0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10487494	0.92[ASN][1000 genomes]
rs12536698	0.92[ASN][1000 genomes]
rs12706803	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13227138	0.92[ASN][1000 genomes]
rs13235029	0.82[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13244426	0.92[ASN][1000 genomes]
rs13244709	0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs13247976	0.92[ASN][1000 genomes]
rs13309235	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1419408	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17660187	0.92[ASN][1000 genomes]
rs2272374	0.82[ASN][1000 genomes]
rs33973710	0.89[ASN][1000 genomes]
rs34121113	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34211107	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs34365152	0.92[ASN][1000 genomes]
rs34388330	0.92[ASN][1000 genomes]
rs34599926	0.89[ASN][1000 genomes]
rs34814259	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34881339	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs35120956	0.89[ASN][1000 genomes]
rs35144279	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35528098	0.92[ASN][1000 genomes]
rs35872516	0.89[ASN][1000 genomes]
rs3752619	0.86[ASN][1000 genomes]
rs3757785	0.82[ASN][1000 genomes]
rs3808111	0.89[ASN][1000 genomes]
rs3808115	0.86[ASN][1000 genomes]
rs58451280	0.89[ASN][1000 genomes]
rs62468943	0.84[AMR][1000 genomes];0.80[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs62483172	0.92[ASN][1000 genomes]
rs6957054	0.82[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6964793	0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6965137	0.81[AFR][1000 genomes]
rs746238	0.89[ASN][1000 genomes]
rs7811506	0.89[ASN][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:127111000-127125000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr7:127117400-127119600	Enhancers	Primary T cells from cord blood	blood
3	chr7:127117400-127119800	Enhancers	Primary T killer naive cells fromperipheralblood	blood
4	chr7:127117600-127119200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr7:127117800-127119600	Enhancers	Primary T helper naive cells fromperipheralblood	blood
6	chr7:127118000-127118800	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
7	chr7:127118000-127123200	Weak transcription	Pancreas	Pancrea
8	chr7:127118200-127119400	Weak transcription	Primary T helper cells PMA-I stimulated	--

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