Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10252945	0.88[EUR][1000 genomes]
rs10253444	0.88[EUR][1000 genomes]
rs10261390	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10261942	0.91[ASN][1000 genomes]
rs10274006	0.92[EUR][1000 genomes]
rs10276724	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10277631	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11768780	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12700010	0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs17350341	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs17350383	0.83[ASN][1000 genomes]
rs17350397	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs17350431	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2024022	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2190277	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2190278	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2301950	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs34205559	0.88[ASN][1000 genomes]
rs71524255	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs71524256	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv498112	chr7:18677922-18991946	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv887813	chr7:18720135-18995552	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv523497	chr7:18896011-18959381	Weak transcription Flanking Active TSS Genic enhancers Enhancers ZNF genes & repeats Active TSS	TF binding region CpG island lncRNA	1 gene(s)	inside rSNPs	diseases
4	esv2756248	chr7:18911960-18977760	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island lncRNA	1 gene(s)	inside rSNPs	diseases
5	nsv1030062	chr7:18915874-18943409	Weak transcription Enhancers Genic enhancers Flanking Active TSS Active TSS	TF binding region CpG island lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:18903000-18940000	Weak transcription	Aorta	Aorta
2	chr7:18928800-18930000	Enhancers	HUVEC	blood vessel
3	chr7:18928800-18931200	Enhancers	Fetal Heart	heart
4	chr7:18929200-18929800	Enhancers	Left Ventricle	heart
5	chr7:18929200-18930000	Enhancers	HMEC	breast
6	chr7:18929200-18930200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr7:18929200-18931400	Enhancers	NHDF-Ad	bronchial
8	chr7:18929200-18931600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr7:18929400-18929600	Enhancers	Fetal Stomach	stomach
10	chr7:18929400-18930000	Enhancers	Dnd41	blood
11	chr7:18929400-18930000	Enhancers	Osteobl	bone
12	chr7:18929400-18930200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
13	chr7:18929400-18930800	Weak transcription	Adipose Nuclei	Adipose
14	chr7:18929400-18931000	Enhancers	Muscle Satellite Cultured Cells	--
15	chr7:18929400-18931200	Enhancers	NHLF	lung

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