The 2.0 version of rSNPBase

Variant report

Variant rs1326334
Chromosome Location chr10:22844807-22844808
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:22822200-22856000 Weak transcription Small Intestine intestine
2 chr10:22822800-22870200 Strong transcription Monocytes-CD14+_RO01746 blood
3 chr10:22823400-22845200 Strong transcription Primary monocytes fromperipheralblood blood
4 chr10:22823800-22845200 Strong transcription Primary T helper cells PMA-I stimulated --
5 chr10:22824000-22853000 Strong transcription Primary T helper cells fromperipheralblood blood
6 chr10:22824400-22845400 Strong transcription Primary T regulatory cells fromperipheralblood blood
7 chr10:22825000-22852800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr10:22825000-22863800 Weak transcription Hela-S3 cervix
9 chr10:22825600-22888000 Weak transcription HMEC breast
10 chr10:22829000-22887400 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr10:22830600-22853000 Weak transcription HUVEC blood vessel
12 chr10:22830800-22861000 Weak transcription Breast Myoepithelial Primary Cells Breast
13 chr10:22831200-22856400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr10:22831800-22852600 Weak transcription A549 lung
15 chr10:22834200-22845400 Strong transcription Primary B cells from peripheral blood blood
16 chr10:22834200-22845400 Strong transcription GM12878-XiMat blood
17 chr10:22834800-22853200 Strong transcription Primary T cells fromperipheralblood blood
18 chr10:22836800-22856200 Weak transcription HepG2 liver
19 chr10:22837200-22848800 Weak transcription Duodenum Mucosa Duodenum
20 chr10:22838000-22851600 Weak transcription Spleen Spleen
21 chr10:22839000-22859400 Strong transcription Primary T cells from cord blood blood
22 chr10:22839400-22855200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
23 chr10:22839600-22851600 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr10:22839600-22853400 Weak transcription NHEK skin
25 chr10:22839600-22865200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr10:22839800-22851600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
27 chr10:22840200-22852600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
28 chr10:22840600-22849000 Weak transcription Primary neutrophils fromperipheralblood blood
29 chr10:22840800-22846400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
30 chr10:22840800-22848800 Weak transcription HUES64 Cell Line embryonic stem cell
31 chr10:22840800-22849400 Weak transcription Primary T killer naive cells fromperipheralblood blood
32 chr10:22840800-22849600 Weak transcription H1 Cell Line embryonic stem cell
33 chr10:22840800-22849600 Weak transcription iPS-15b Cell Line embryonic stem cell
34 chr10:22840800-22853000 Weak transcription H9 Cell Line embryonic stem cell
35 chr10:22841000-22853800 Weak transcription K562 blood
36 chr10:22841000-22855200 Weak transcription ES-I3 Cell Line embryonic stem cell
37 chr10:22841200-22852200 Weak transcription HUES48 Cell Line embryonic stem cell
38 chr10:22841200-22855400 Weak transcription iPS-20b Cell Line embryonic stem cell
39 chr10:22842200-22845400 Strong transcription Fetal Thymus thymus
40 chr10:22842400-22855400 Weak transcription Primary T killer memory cells from peripheral blood blood
41 chr10:22842600-22849400 Weak transcription Dnd41 blood
42 chr10:22843800-22845000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
43 chr10:22843800-22853000 Weak transcription Esophagus oesophagus
44 chr10:22843800-22855400 Weak transcription Colonic Mucosa Colon
45 chr10:22844000-22853000 Weak transcription HUES6 Cell Line embryonic stem cell
46 chr10:22844000-22853000 Weak transcription Duodenum Smooth Muscle Duodenum
47 chr10:22844000-22853000 Weak transcription Osteobl bone
48 chr10:22844000-22855200 Weak transcription Placenta Placenta
49 chr10:22844000-22876600 Weak transcription Right Ventricle heart
50 chr10:22844200-22845200 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin

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Last update: Aug 31, 2015