The 2.0 version of rSNPBase

Variant report

Variant rs7923540
Chromosome Location chr10:22836444-22836445
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:22822200-22856000 Weak transcription Small Intestine intestine
2 chr10:22822800-22870200 Strong transcription Monocytes-CD14+_RO01746 blood
3 chr10:22823000-22844600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
4 chr10:22823400-22845200 Strong transcription Primary monocytes fromperipheralblood blood
5 chr10:22823600-22842200 Weak transcription Colon Smooth Muscle Colon
6 chr10:22823800-22845200 Strong transcription Primary T helper cells PMA-I stimulated --
7 chr10:22824000-22844400 Strong transcription Primary B cells from cord blood blood
8 chr10:22824000-22844800 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr10:22824000-22853000 Strong transcription Primary T helper cells fromperipheralblood blood
10 chr10:22824200-22839000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr10:22824200-22840000 Strong transcription Primary T helper 17 cells PMA-I stimulated --
12 chr10:22824400-22845400 Strong transcription Primary T regulatory cells fromperipheralblood blood
13 chr10:22824800-22840800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr10:22825000-22840200 Weak transcription Placenta Amnion Placenta Amnion
15 chr10:22825000-22840600 Strong transcription Primary neutrophils fromperipheralblood blood
16 chr10:22825000-22852800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr10:22825000-22863800 Weak transcription Hela-S3 cervix
18 chr10:22825200-22840000 Strong transcription Fetal Stomach stomach
19 chr10:22825400-22836800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr10:22825400-22838000 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr10:22825400-22838000 Strong transcription Fetal Intestine Small intestine
22 chr10:22825600-22843800 Weak transcription Stomach Mucosa stomach
23 chr10:22825600-22888000 Weak transcription HMEC breast
24 chr10:22825800-22843600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr10:22826000-22843400 Weak transcription Fetal Brain Female brain
26 chr10:22826200-22843600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
27 chr10:22826600-22836800 Strong transcription Aorta Aorta
28 chr10:22826600-22843400 Weak transcription Colonic Mucosa Colon
29 chr10:22827000-22842200 Weak transcription Right Atrium heart
30 chr10:22828400-22836800 Strong transcription Brain Inferior Temporal Lobe brain
31 chr10:22828600-22837200 Weak transcription NH-A brain
32 chr10:22828800-22840200 Weak transcription ES-WA7 Cell Line embryonic stem cell
33 chr10:22828800-22841400 Weak transcription HSMM muscle
34 chr10:22829000-22887400 Weak transcription Rectal Mucosa Donor 31 rectum
35 chr10:22829800-22836600 Strong transcription Brain Cingulate Gyrus brain
36 chr10:22830200-22839200 Strong transcription Brain Substantia Nigra brain
37 chr10:22830600-22840400 Weak transcription Fetal Brain Male brain
38 chr10:22830600-22841200 Weak transcription Fetal Lung lung
39 chr10:22830600-22842400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr10:22830600-22853000 Weak transcription HUVEC blood vessel
41 chr10:22830800-22837400 Weak transcription Osteobl bone
42 chr10:22830800-22839600 Weak transcription iPS-18 Cell Line embryonic stem cell
43 chr10:22830800-22861000 Weak transcription Breast Myoepithelial Primary Cells Breast
44 chr10:22831000-22839000 Weak transcription Muscle Satellite Cultured Cells --
45 chr10:22831200-22842800 Weak transcription Ovary ovary
46 chr10:22831200-22843200 Weak transcription NHLF lung
47 chr10:22831200-22843600 Weak transcription Esophagus oesophagus
48 chr10:22831200-22856400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr10:22831400-22839600 Weak transcription iPS-15b Cell Line embryonic stem cell
50 chr10:22831600-22842800 Weak transcription Rectal Smooth Muscle rectum

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Last update: Aug 31, 2015