Variant report

Variant rs1330796
Chromosome Location chr6:4466632-4466633
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:24 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:4460000-4472400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr6:4462400-4469400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
3 chr6:4465600-4467400 Enhancers Breast Myoepithelial Primary Cells Breast
4 chr6:4466200-4467200 Enhancers HUVEC blood vessel
5 chr6:4466200-4467600 Enhancers Cortex derived primary cultured neurospheres brain
6 chr6:4466400-4466800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
7 chr6:4466400-4466800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr6:4466400-4466800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr6:4466400-4466800 Enhancers Fetal Lung lung
10 chr6:4466400-4466800 Enhancers HMEC breast
11 chr6:4466400-4466800 Enhancers NHLF lung
12 chr6:4466400-4467000 Enhancers Brain Anterior Caudate brain
13 chr6:4466400-4467200 Enhancers Brain Hippocampus Middle brain
14 chr6:4466400-4467200 Enhancers Brain Substantia Nigra brain
15 chr6:4466400-4467400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
16 chr6:4466400-4467400 Enhancers Brain Angular Gyrus brain
17 chr6:4466400-4467600 Enhancers Brain Inferior Temporal Lobe brain
18 chr6:4466400-4468000 Enhancers Placenta Placenta
19 chr6:4466600-4466800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
20 chr6:4466600-4466800 Enhancers Colon Smooth Muscle Colon
21 chr6:4466600-4467000 Flanking Active TSS Stomach Smooth Muscle stomach
22 chr6:4466600-4467000 Enhancers NH-A brain
23 chr6:4466600-4467400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr6:4466600-4467400 Enhancers Brain Cingulate Gyrus brain

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