Variant report
| Variant | rs13354612 |
|---|---|
| Chromosome Location | chr5:58556666-58556667 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:58541200-58558400 | Weak transcription | Pancreas | Pancrea |
| 2 | chr5:58541600-58560000 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 3 | chr5:58541600-58562400 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 4 | chr5:58541800-58562800 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 5 | chr5:58551400-58557600 | Enhancers | Rectal Smooth Muscle | rectum |
| 6 | chr5:58552200-58556800 | Weak transcription | Brain Substantia Nigra | brain |
| 7 | chr5:58552400-58558400 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 8 | chr5:58552600-58560400 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 9 | chr5:58553400-58560000 | Weak transcription | Fetal Lung | lung |
| 10 | chr5:58553800-58558400 | Weak transcription | Left Ventricle | heart |
| 11 | chr5:58553800-58558400 | Weak transcription | Right Atrium | heart |
| 12 | chr5:58553800-58568600 | Weak transcription | Fetal Muscle Leg | muscle |
| 13 | chr5:58554200-58556800 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 14 | chr5:58554200-58556800 | Weak transcription | Fetal Intestine Large | intestine |
| 15 | chr5:58554200-58556800 | Weak transcription | Fetal Intestine Small | intestine |
| 16 | chr5:58554200-58556800 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 17 | chr5:58554200-58557000 | Weak transcription | Fetal Kidney | kidney |
| 18 | chr5:58554200-58558400 | Weak transcription | Psoas Muscle | Psoas |
| 19 | chr5:58554200-58559600 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 20 | chr5:58554200-58561000 | Weak transcription | Stomach Mucosa | stomach |
| 21 | chr5:58554200-58562600 | Weak transcription | Duodenum Mucosa | Duodenum |
| 22 | chr5:58554400-58558400 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 23 | chr5:58554800-58557400 | Flanking Active TSS | A549 | lung |
| 24 | chr5:58555200-58556800 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 25 | chr5:58555200-58557000 | Enhancers | Hela-S3 | cervix |
| 26 | chr5:58555200-58557200 | Enhancers | Skeletal Muscle Female | skeletal muscle |
| 27 | chr5:58555800-58556800 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 28 | chr5:58555800-58557800 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 29 | chr5:58555800-58558600 | Enhancers | Colon Smooth Muscle | Colon |
| 30 | chr5:58556200-58558400 | Weak transcription | Fetal Heart | heart |
| 31 | chr5:58556600-58558200 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
