Variant report
Variant | rs16889495 |
---|---|
Chromosome Location | chr5:58558388-58558389 |
allele | C/T |
Outlinks | Ensembl   UCSC |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr5:58541200-58558400 | Weak transcription | Pancreas | Pancrea |
2 | chr5:58541600-58560000 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
3 | chr5:58541600-58562400 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
4 | chr5:58541800-58562800 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
5 | chr5:58552400-58558400 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
6 | chr5:58552600-58560400 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
7 | chr5:58553400-58560000 | Weak transcription | Fetal Lung | lung |
8 | chr5:58553800-58558400 | Weak transcription | Left Ventricle | heart |
9 | chr5:58553800-58558400 | Weak transcription | Right Atrium | heart |
10 | chr5:58553800-58568600 | Weak transcription | Fetal Muscle Leg | muscle |
11 | chr5:58554200-58558400 | Weak transcription | Psoas Muscle | Psoas |
12 | chr5:58554200-58559600 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
13 | chr5:58554200-58561000 | Weak transcription | Stomach Mucosa | stomach |
14 | chr5:58554200-58562600 | Weak transcription | Duodenum Mucosa | Duodenum |
15 | chr5:58554400-58558400 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
16 | chr5:58555800-58558600 | Enhancers | Colon Smooth Muscle | Colon |
17 | chr5:58556200-58558400 | Weak transcription | Fetal Heart | heart |
18 | chr5:58556800-58558600 | Enhancers | Rectal Mucosa Donor 31 | rectum |
19 | chr5:58557000-58559200 | Weak transcription | Hela-S3 | cervix |
20 | chr5:58557200-58560000 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
21 | chr5:58557200-58560600 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
22 | chr5:58557200-58562400 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
23 | chr5:58557400-58560600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
24 | chr5:58558000-58558800 | Enhancers | Rectal Smooth Muscle | rectum |
25 | chr5:58558000-58560600 | Weak transcription | Fetal Intestine Large | intestine |
26 | chr5:58558000-58561000 | Weak transcription | Fetal Intestine Small | intestine |
27 | chr5:58558200-58558600 | Enhancers | Skeletal Muscle Female | skeletal muscle |
28 | chr5:58558200-58559000 | Transcr. at gene 5' and 3' | A549 | lung |