The 2.0 version of rSNPBase

Variant report

Variant rs13374129
Chromosome Location chr1:155763904-155763905
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:155715400-155789200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr1:155715600-155764600 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr1:155716000-155793400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr1:155716600-155781800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr1:155717400-155795800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
6 chr1:155720200-155798200 Strong transcription Fetal Thymus thymus
7 chr1:155720200-155803600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr1:155720400-155796800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
9 chr1:155730400-155764200 Weak transcription Psoas Muscle Psoas
10 chr1:155732200-155789200 Weak transcription Pancreatic Islets Pancreatic Islet
11 chr1:155737200-155772200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
12 chr1:155743200-155773400 Weak transcription iPS-15b Cell Line embryonic stem cell
13 chr1:155746400-155774000 Weak transcription Pancreas Pancrea
14 chr1:155746400-155791400 Weak transcription Stomach Mucosa stomach
15 chr1:155747000-155764200 Weak transcription Brain Substantia Nigra brain
16 chr1:155747600-155764000 Weak transcription Brain Hippocampus Middle brain
17 chr1:155747600-155764200 Weak transcription A549 lung
18 chr1:155747600-155764400 Weak transcription Ovary ovary
19 chr1:155747600-155776200 Weak transcription Right Ventricle heart
20 chr1:155747600-155787200 Weak transcription Esophagus oesophagus
21 chr1:155747800-155764400 Weak transcription NHEK skin
22 chr1:155747800-155785600 Weak transcription Fetal Brain Male brain
23 chr1:155747800-155791200 Weak transcription Fetal Heart heart
24 chr1:155748000-155789400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr1:155748800-155771600 Weak transcription Rectal Smooth Muscle rectum
26 chr1:155749800-155766400 Strong transcription Primary neutrophils fromperipheralblood blood
27 chr1:155751800-155765600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr1:155751800-155777600 Strong transcription Monocytes-CD14+_RO01746 blood
29 chr1:155752000-155765800 Strong transcription Adipose Nuclei Adipose
30 chr1:155752000-155771000 Strong transcription Fetal Muscle Leg muscle
31 chr1:155754800-155770600 Weak transcription Primary T killer memory cells from peripheral blood blood
32 chr1:155755000-155772600 Weak transcription Gastric stomach
33 chr1:155755200-155764200 Weak transcription Colon Smooth Muscle Colon
34 chr1:155755200-155764200 Weak transcription Fetal Kidney kidney
35 chr1:155755200-155768600 Weak transcription HSMMtube muscle
36 chr1:155755200-155771600 Weak transcription Small Intestine intestine
37 chr1:155755200-155774000 Weak transcription Colonic Mucosa Colon
38 chr1:155755400-155764200 Weak transcription Brain Angular Gyrus brain
39 chr1:155755400-155768400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
40 chr1:155755600-155777400 Strong transcription Fetal Adrenal Gland Adrenal Gland
41 chr1:155757200-155765200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
42 chr1:155757800-155765800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
43 chr1:155758000-155777200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr1:155758200-155777200 Strong transcription Fetal Intestine Large intestine
45 chr1:155758400-155764200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr1:155758800-155778400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr1:155759000-155777200 Strong transcription Primary T helper cells fromperipheralblood blood
48 chr1:155759200-155765000 Strong transcription Breast Myoepithelial Primary Cells Breast
49 chr1:155759200-155777400 Strong transcription Placenta Placenta
50 chr1:155759400-155765600 Strong transcription Cortex derived primary cultured neurospheres brain

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Last update: Aug 31, 2015